Panicum virgatum (switchgrass): 120668467
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Entry
120668467 CDS
T07260
Name
(RefSeq) glutamate receptor 3.4-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120668467
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120668467
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
ATG27
Motif
Other DBs
NCBI-GeneID:
120668467
NCBI-ProteinID:
XP_039804116
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Position
4N:46560466..46566250
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AA seq
930 aa
AA seq
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MGALQLMLPLLVLLAAAAGARPSEVAVGALFTFDSTIGRAARLAIELAVDDVNADRTVLA
GTQLKVITQDTNCSGFLGTIEALQLMENNVVAVIGPQSSGIGHVISHVVNELHVPLLSFA
ATDPTLSASEYPYFIRTTISDYFQMNAAASIVEHYQWKEVTAIFVDDDYGRGGVSALGDA
LAEKRARISYKAAIPPNSNTDMINDVLFRANMMESRVMVVHVNPDTGMRIFSIANKLQML
ASGYVWIVTDWLAAVLDSSASRDLKYMSHIQGLIVLRQHIPESAAKNKFISKWNNVARNR
SITSGLNSYGFYAYDSVWAVARGIDQFLNSGQQINFSTDPRLHDSNGSNLQLSTLKIFDG
GEQMLQQLLLTNFTGLTGPVQFNSDRDLVRPAYDILNIGGSGSQLIGYWSNYSGLSVTAP
EILYQKPPNTSSIVQQLHNVVWPGDSTTTPKGWVFPNNGQPLRVGVPIKASFKELVAGGR
GPNNVTGYCIDIFNAAINLLPYPVPCQFVTIGDGTKNPNYDDIINMVAANSLDAAVGDFA
IVRNRTKIAEFTQPYIESGLVIVAPVKQATSSAWAFLKPFTLEMWCVTGALFLFVGIVVW
ILEHRTNEEFRGSPRRQVITIFWFSFSTMFFAHRQNTVSALGRFVLIIWLFVVLIINSSY
TASLTSILTVQQLGTGITGIDDLISSALPIGYQAGKFTRNYLIEELNIPESRLVPLNTIQ
EYADALKRGPKDGGVAAIVDEMPYVDIFLSYHCNFRVVGQEFTKEGWGFAFQRDSPLAAD
LSTAILQLSETGQLQRIHDEWLTRSSCSSDDSEVGATRLGLRSFWGLFLVCALICLLALL
VFFIRVCWQYSKYSNSEAAGEPSAADADAAAAAADAAERQRRPSRLGSFKELIQFVDKKE
EEVRRTMKRRSSEKDNQTAGSSDVQSVISA
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgcttcagttgatgcttccgctgttggtgctgctcgccgccgcggcgggggct
cggccgagcgaggtggccgtgggcgcgctcttcaccttcgactccaccattggccgcgcg
gcgcggctcgccatcgagctcgccgtcgacgacgtcaacgctgaccgcacagtactcgcg
gggacccagctcaaggtgatcacccaggacaccaactgcagcggctttctcgggaccatc
gaagcattgcagctaatggaaaacaatgtcgttgccgttattggcccacaatcctctggg
ataggccatgtcatttcccatgttgttaatgagctacatgttcctcttctatcatttgcg
gccacagacccaactctttctgcatcagagtacccttacttcataaggacaaccataagt
gactacttccaaatgaatgccgctgctagcattgttgaacactatcagtggaaagaggta
actgctatattcgttgatgatgattatgggcgaggtggtgtctcagcccttggtgatgca
cttgcagaaaagagggcaaggatttcgtataaggcagctattcctcctaattcaaataca
gacatgatcaacgatgtattgtttagagcaaatatgatggaatcaagggtcatggttgtg
catgtcaatcctgacacggggatgagaatattttctattgctaacaagctccagatgctg
gccagcggctatgtctggatagtgactgattggctagctgctgtcctggattcctcagcg
tctagagatcttaaatatatgagtcatattcagggactaattgttcttcgtcagcacatt
cctgaatctgctgccaagaataagttcatatctaaatggaataatgtggcccgtaataga
agtattacttctggcctgaactcatacggcttttatgcatatgactcagtttgggctgtt
gctcgtggtatcgatcaatttctcaatagtgggcaacagatcaacttctctacagatcca
aggttgcatgattctaatggaagcaatttgcagctatcaactctcaagatatttgatggt
ggtgagcagatgctacagcaacttctcctcacaaattttacaggcctaactggtccagtc
caatttaattcagaccgcgatttggtacgcccagcatatgatatccttaatattggtggt
tctggctcccagttgatcggctattggtccaattactcaggcctctctgttactgctcct
gaaattttgtatcagaagccaccaaatacttcttcaattgtccagcagctccataatgtg
gtctggccaggtgattccactactacaccaaaggggtgggttttcccaaacaatggccag
cctctgcgagttggtgttccaatcaaagcaagctttaaggaattagtggcaggtggcagg
ggccctaataatgtgactggttactgcattgatatattcaacgcagcaatcaatctgctt
ccttatccagttccttgccaattcgtaacaattggggatggaacaaagaacccaaactat
gacgatattattaatatggttgctgccaattcccttgatgcagctgttggcgactttgct
attgtgagaaatagaacaaagattgcagaattcacgcagccttatattgaatcagggctc
gtgatagtagcaccagtgaaacaagcaacttcaagtgcctgggctttccttaaacctttc
acattggagatgtggtgtgtgacaggtgctctttttcttttcgtggggatagttgtttgg
attcttgaacatcggactaatgaggagtttcgaggctctccacgacgacaagttataaca
atattttggtttagcttctcaacaatgttctttgcacacagacagaacactgttagcgca
cttgggcggttcgtgttgatcatatggttgtttgttgtgctgatcatcaattcaagttat
actgctagcttgacgtcaatcctcacagtccaacagctagggacaggaatcactgggatt
gacgatttgatttcgagtgctttacctattggatatcaggccggaaaatttaccagaaat
tacctgatcgaagagctcaatattcctgagtctcgactggttccacttaatacaatccag
gaatatgctgatgcccttaaacgtggaccaaaagatggcggtgttgctgcaattgttgat
gagatgccatatgttgacattttcttgtcataccactgcaatttcagagtagtgggacag
gagttcacgaaggagggatggggctttgcattccagagagattccccccttgctgcagac
ttatcaacagccatccttcagctttcagagactgggcagcttcagagaattcacgacgag
tggttgacgcggtctagttgctcctctgatgacagtgaagtgggagcgaccaggcttggc
ctcagaagcttttggggccttttcctcgtgtgtgccctgatatgtctcttagctctgctg
gtgttcttcatacgagtctgctggcagtatagcaagtactccaattctgaagctgctggt
gagcccagtgcagctgatgctgatgctgctgccgctgccgctgatgctgccgaaagacag
cgaaggccatcacgccttggcagcttcaaagaactgatacaatttgtcgacaagaaggag
gaagaagttaggagaacgatgaaacgaagatcaagcgagaaagataaccaaactgcagga
tcctcagatgttcagtcagtgatttcagcatag
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