Panicum virgatum (switchgrass): 120668468
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Entry
120668468 CDS
T07260
Name
(RefSeq) glutamate receptor 3.5-like
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120668468
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120668468
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-GeneID:
120668468
NCBI-ProteinID:
XP_039804119
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Position
4N:46575001..46580901
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AA seq
924 aa
AA seq
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MGAAQLVAWFLAFAAAAGVVSAAGARPSEVAVGALFTYDSTIGHAARLAIELAVDDVNAD
GTVLSGTKLSLKSRDTNCSAFIGTVEALQLMEENVVAVIGPQSSGIGHVISHVANELHIP
LLSFAATDPTLSALEYPYFLRTTISDYFQMNAVASIVDYYQWKRVTAIYVDDDYGRGGVS
ALGDALASKRAMISYKAAIPPNSNSDVISDILFTANMMESRVMVVHVNPDTGMRIFSAAN
ELRMMATGYVWIVTDWLAAVLDSSASRDLKDMSHIRGLIVLRQHTPESDVKNEFISKWNT
VAHNRSITSGLNSYSFYAYDSVWTVARAIDQFLNSGQQINFSTDPKLHDSNGSTLRLSTL
KIFDGGEQMLQQLLLTNFTGVTGPVQFGSDGHLVRPAYDILNVGGSGYRLIGYWSNHSGL
SVAAPEILYQKPPNTSAQQLYNVLWPGDSTTTPKGWVFRNNGKALRVGVPNKASFKDLVS
SRGPGNVTGYCIDVFNAAIKLLPYPTPVQFVTIGDGTKNPSYIGIVQMVAANILDAAVGD
FAIVRNGTAISEYTQPYVEAGLVIVAPVKQINPSAWAFLKPFTLEMWCVTGALFILVGIV
VWLLEHRINEEFRGSPRQQVITIFWFSFSTMFTSHRENVLSTLGRFVLIIWLFVVLIINS
SYTASLTSILTVQQLDTGITGLDSLISSSLPIGYQNGKFTKKYLIQELNIPVSRLVALNT
IQEYADALNRGPKYGGVAAIVDEKPYIDIFLSYYCNFRIVGQQFTREGWGFAFQRDSPLA
ADMSTAILQLSESGQLQRIHDEWFTRPECASDDESQVGATRLGVGSFSGLFLMCALTCIF
ALVVFFIRICWQYNQYSSSEAASEPSAPDADAIQRRPSGRSFKELLQFVDKKEEEIRMKM
KRRSSDKDNQAAGSSDALSVTSAY
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcggctcagctggtggcttggttcttggcgttcgccgccgccgcgggggtggtg
tcggcggcgggggcgcggccgagcgaggtggccgtgggcgccctcttcacgtacgactcc
actattggccacgcggcgcggctcgccatcgagctcgccgtcgacgacgtcaacgcggac
ggcacggtgctctcggggacgaaactcagtctgaagagccgcgacaccaactgcagcgcc
tttattgggaccgtcgaagcattgcagcttatggaggaaaatgtggttgcggtgattggg
ccgcaatcctcagggataggccatgtaatctctcatgttgctaatgagctacacattcct
cttctgtcatttgcggccacagatccaactctttctgcattagagtatccctacttctta
agaacaacaataagtgactacttccaaatgaatgctgttgctagcattgttgattactat
caatggaaaagggtgactgctatatatgtcgatgatgattatgggcgaggtggtgtgtcc
gcccttggtgatgcacttgcatctaaaagggcaatgatttcatataaagcagctattcct
ccaaattcaaattcagacgtgataagtgatatactgtttacagcaaacatgatggaatcg
agggtcatggttgtgcatgtcaatcctgacaccgggatgagaatattttctgcagctaac
gagctccggatgatggccactggttatgtctggatagtaactgattggctagctgctgtc
cttgattcctcggcgtctagagatcttaaagatatgagtcatattcggggactaattgtt
cttcgtcagcacactcctgaatctgatgtcaagaatgagttcatatccaaatggaatact
gtggctcataacagaagtattacttctggcttgaactcatacagcttttatgcttatgac
agtgtttggactgttgctcgtgcaatcgatcaattcctcaacagtgggcaacagatcaac
ttctcaacagatcccaagttgcacgattcaaatggcagcactttgcgtctatcaactctc
aagatatttgatggtggtgagcagatgctacagcaacttctactcacaaactttacaggt
gtgacaggtccagtccagtttggttcagacggccatttagtacgcccagcgtatgatata
cttaatgttggtggttctggctaccgcttgattggctattggtctaaccattctggcctt
tctgttgctgctccagaaattttgtatcagaagccaccaaatacaagtgcccagcagctg
tacaatgtgctatggcccggtgactccacaactacgcctaagggttgggtattccgaaac
aatggcaaggctctgagagttggggttcctaataaagcaagctttaaggatttagtgtca
agcagaggccctggtaatgtgacgggttattgcattgatgtattcaacgcggcaattaaa
ctgctcccttacccaactcctgtccaatttgttactattggggatggcacaaagaaccca
agctatattggcatcgttcaaatggttgctgccaatatccttgatgcagctgtaggtgac
tttgctatagtgagaaatggaacagcgatttcagaatatacacagccttatgttgaggca
gggctcgtgatagtagcgccggtgaaacaaataaatccaagtgcctgggctttccttaaa
cccttcacattggagatgtggtgtgtcacaggtgctctttttatcttggtggggatagta
gtttggcttcttgaacatcggattaatgaggagtttcgaggctctccacggcaacaagtt
ataacaatattctggttcagcttctcaacaatgttcacctcacacagagaaaacgtctta
agcacgcttgggcggttcgtgttgataatatggttatttgttgtgctgataatcaattca
agttatactgctagcttgacgtcaatcctcacagtccaacagctcgacacaggaattaca
gggcttgatagtttgatttccagttctttacctattggataccagaatggaaaatttacc
aaaaagtacctgattcaagaactcaatattccagtgtctcgattggtagcactaaatacg
atccaggaatatgctgatgccctcaaccgtggaccaaaatacggcggtgttgccgcgatt
gtggatgagaagccgtatattgatatcttcctgtcatactactgcaacttcagaatagtg
ggacagcaattcacaagggaaggatggggctttgcattccagagggactcccctcttgct
gcagacatgtcgacagccatacttcaactttcagagagtggccaacttcagagaattcat
gacgagtggttcacgcggcctgagtgcgcctctgatgatgagagccaggtgggagcaacc
aggcttggcgtcggaagcttttcaggccttttcctcatgtgtgccctgacatgtatcttc
gctcttgtggtgttcttcatacggatctgctggcaatacaaccagtactccagttctgaa
gctgccagtgagcccagtgcacccgatgctgatgctatccagcggaggccatcaggccgc
agcttcaaagagctgttacagtttgtcgacaagaaggaggaagaaatccggatgaagatg
aaacgaagatcaagcgacaaagataaccaagctgcaggttcctcagatgcgctgtcagtg
acttcagcatactaa
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