Panicum virgatum (switchgrass): 120668556
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Entry
120668556 CDS
T07260
Name
(RefSeq) probable beta-1,4-xylosyltransferase IRX14
KO
K20871
putative beta-1,4-xylosyltransferase IRX14 [EC:2.4.2.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120668556
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120668556
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_43
Motif
Other DBs
NCBI-GeneID:
120668556
NCBI-ProteinID:
XP_039804233
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Position
4N:47421996..47425512
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AA seq
530 aa
AA seq
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MMKSLLPQSQLRRSSARPSGAAAAAGGDGAAADGGGAGARAPASSTFWFLLHALCCLISL
FLGFRFSRLLFFLLFSTTALYHSTTSSSAAAVLRATTTTTTTTTTTTTTTNTFTLSFAAA
NPPPSNPANRTALEAAAAADKGATSGNPQSHVVVGRHGIRIRPWPHPDPVEVMRAHRIME
RVQEEQRRWYGVKEPRQVLVVTPTYSRAFQALHLTGLLHSLRNVPYPLTWIVVEAGGTTN
ATASLLARSGLTFVHIPFPDRMPHVWADRHATENRMRLHALRAIRERKMDGVVVFADDSN
VHSMELFDEVQKVQWMGAVSVGILAHTGAADQPRLSKEDKQNMPLPVQGPACNSSGHLAG
WHTFNSLPFSGKTATVVGEAAPVLPRGLEWAGFVLNSRMLWKEAEGKPDWVKDLDAVGEN
GEEIENPLTLLNDPSSVEPLGNCGKKVLLWWLRVEARADSKFPQGWVIEPPLDIVVPAKR
TPWPETTTELPSELLDDKQDQEDRRLSRANKSSRPRSTTERKGDLQGQEN
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtcgctgctgccgcagagccagctgcggcgctcgtcggcgcggccgtcgggg
gccgccgccgccgcgggcggagacggggccgcggccgacggcggcggggccggggcgcgg
gcgcccgcctcgtccaccttctggttcctgctccacgcgctctgctgcctcatctcgctc
ttcctcggattccgcttctcgcggctcctcttcttcctgctcttctccaccaccgcgctc
taccactccaccacctcctcctccgccgccgcggtcctgcgcgccaccacgacgaccaca
accaccacgaccacgacgaccaccaccaccaacaccttcacgctctccttcgccgccgcg
aacccaccgccctccaaccccgccaaccgcaccgcgctggaggcggcagcggcggcggac
aagggcgcgacctccgggaacccccagagccacgtggtggtggggcggcacgggattcgg
atccgcccgtggccgcacccggaccccgtcgaggtgatgcgggcgcaccggatcatggag
cgcgtgcaggaggagcagcgccgctggtacggcgtcaaggagccgaggcaggtgctcgtc
gtcacgccgacctactcccgcgcgttccaggcgctccacctcaccggcctactccactcc
ctccgcaacgtgccgtacccgcttacctggatcgtggtcgaggcgggcggcaccaccaac
gccacggcgtccctgcttgcgcgctctggcctcaccttcgtccacatccccttccctgac
cgcatgccccatgtctgggcagaccgccatgctactgagaaccggatgcgcctccatgcc
ctacgggcgattcgagagaggaagatggatggcgtagttgtatttgcagatgacagcaat
gttcatagcatggagctctttgatgaggtgcagaaggtccagtggatgggtgctgtatcc
gttggaatcctagcacatactggagcggcagaccaaccacgcctcagcaaggaggacaag
cagaacatgcctcttccagtccagggccctgcttgcaactcctcggggcatctggctgga
tggcacacgtttaactcattgccgttttctgggaagactgccacagtggttggtgaggca
gcccctgttctgcccaggggtttggagtgggctggctttgtgttgaactcgagaatgctg
tggaaggaggcagagggcaagcctgactgggtgaaggatcttgatgctgttggtgagaat
ggagaggagattgagaacccacttactctattgaatgatccgtcctctgttgaaccactg
gggaactgtgggaagaaggtcctactgtggtggctccgtgtggaagctcgggctgatagc
aagtttcctcaggggtgggtgattgagccacctttggacattgtcgttcctgcaaaacgc
accccatggcctgaaaccaccaccgagcttccatccgagttgttggatgacaagcaagac
caggaagataggcggctgtcaagagcgaacaaatcatctcggccccgaagcaccacggaa
cggaagggtgaccttcaagggcaagagaactga
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