KEGG   Panicum virgatum (switchgrass): 120668574
Entry
120668574         CDS       T07260                                 
Name
(RefSeq) DNA repair protein REV1 isoform X1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    120668574
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120668574
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    120668574
SSDB
Motif
Pfam: IMS IMS_HHH_1 IMS_C BRCT BRCT_2 POLH-Rev1_HhH PTCB-BRCT LIG3_BRCT IMS_HHH DUF1805 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 120668574
NCBI-ProteinID: XP_039804246
LinkDB
Position
4N:complement(47585618..47596496)
AA seq 1142 aa
MSSTSSGRRAPSTAAAAAAAASSPGQKRSRDEAGGGSPSDPDAAPAKNPRRAFASSPFAD
FGSYMAAKNRKLAAQFDADAATSGAATGGLFIGVSIFVDGFTIPSSQELKEIMLSNGGRF
VNYFSRHTVTHIVCTNLPDSKMKNLRAFSKGLPVVKPAWVVDSLAENRLLSCAPYQINQN
SSSSRKQMKLSAFFSEKQNEIRHQGEQNNQNKDIEFQSSSAQEVSQFQSGEFGSEVSLDN
TELSKDSLSSDEQMASSFEERVSGDFAVDEGEYDCETACSERRGNDMDGKFGVAQSPDAK
SRCSNLCSTSSTGSHLSIPLEKRAAKPSNRPHSTLTDPNFVENYFKYSRLHFIGTWRNRY
RKRFSNLLEAKSIKLNADHSEKKTIIHIDMDCFFVSVVIRNMPELHDKPVAVCHSDNPKG
TAEISSANYPARNYGIKAGMFVRDAKARCPHLMIVPYNFDAYEEVADQFYGILHKHCSKV
QALSCDEAFLDMTECLDDDPEEVTRRIRSEIFHATKCTASAGIAENMLLARLATRSAKPN
GQCFIPSEKADDYLSNLSIKALPGIGHTVSTKLKSKEIEYCGQLRNISKDALHKDFGKKI
GDLLWNYCRGIDNSVVGSVQETKSVGAEINWGVRFNDNKDAEHFLTNLCKEVSLRLQGCG
VQGRTITLKVKTRREGAGEPIKYMGCGDCETTSRSMTVWGSQIAGATDSFVTLQRIAKQL
FSALRLDVKEVRGVGLSMSKLEHADLARGAPQGNMLESWLASPAAKLKKRRGEMLGNVDV
AGASVLQDLRRSGPLSMAVTSHSSELNLRSDRSSGAHNVELPPLSQLDLEVLKNLPPEIM
SEMNDMYKGELQGLLDTLNNDKGKESSSKSLALPAVTQNSVPSGDANLQGYRDHKDSMHL
EEDTKGKSVKQLSEVKAANDASCSRACELVQRTSKCVTQLDLMPDSLSQADLTVLQELPE
DVKADLFSALPLHRSGDPTCNASNVSESKSPNVSGAENKSLNDGRADGPKDPRIFLPPGS
SQKWIERLRVSSCPILNVIAEQHTDSSCSRPLSSILEPVVSFLPLCPTSGSEEWNETLSC
LSELLRQYIQLKVETDIEELYKCFCLLKRFASESEFFRELHDSILPFLQDSVNQHYGGTL
HF
NT seq 3429 nt   +upstreamnt  +downstreamnt
atgagctccacctcatccggccgccgcgccccgtcgacggcggcggcggcggcggcggcc
gcctcgtccccggggcagaagcggtcgagggacgaggccggcggcgggtccccttcggac
cccgacgccgcccccgccaaaaaccctcgccgcgccttcgcctcctccccgttcgccgac
ttcggcagctacatggccgcgaagaacagaaagctcgccgcgcagttcgacgccgacgcc
gccacctccggcgcggccaccggcggattgttcatcggggtctccatcttcgtcgacggc
ttcaccatcccttctagccaggagctgaaggagattatgctgagcaacggtgggcgtttt
gtcaactacttctcaaggcatacggtgacgcacattgtttgcaccaacctgcctgatagc
aaaatgaagaacctgagagcattcagcaagggacttcctgttgtgaagccggcatgggtg
gtggattctctggcagagaacaggctcctcagctgtgctccctatcaaataaatcagaat
agctcttcaagccgaaagcagatgaagctttctgctttcttttctgagaaacaaaatgaa
atacgccaccagggggagcaaaacaatcaaaataaggacattgagttccaatcttcttct
gctcaggaggtatcacagtttcaaagtggggagtttggaagtgaagtttcattggataat
acggagttatcaaaggactcgttatcctcagatgaacagatggcgtcatcatttgaagaa
agagttagtggagattttgcagttgatgagggtgagtatgattgtgaaactgcatgttca
gagaggaggggtaatgacatggatggtaaatttggtgtggctcagtcccctgatgctaag
tcaaggtgttcaaacttatgcagtacaagctccacaggcagccatttgtccattccgctg
gagaaacgtgcagctaaaccttctaatcggccacattcaaccctcacagacccaaatttt
gttgagaattattttaagtactctcgactgcacttcattgggacatggaggaatcggtac
agaaagcgcttctcaaatttactggaagctaaaagcattaagttgaatgctgatcattca
gagaagaaaacaattattcatattgatatggattgctttttcgtgtctgtcgtcatcaga
aatatgccagaattgcatgataaaccagtagcagtttgtcattcagacaatcctaaagga
acagcagaaatatcatctgcaaactatccggcacgaaattatggaataaaagctggcatg
tttgttagagatgctaaagctcgatgtcctcacctaatgattgttccatataacttcgat
gcatatgaggaggttgctgatcagttctatgggatcttgcacaaacattgcagtaaggtt
caggctttgagttgtgatgaagcctttttggatatgactgaatgcttggatgatgatcct
gaggaagtaacacggagaatcagaagtgagatttttcatgcaactaagtgtactgctagt
gcaggtattgctgaaaacatgctcctagctcggttagctaccagatccgcaaagccgaat
ggacaatgctttattccctctgaaaaggctgatgattacttaagcaatctctctatcaaa
gcacttcctggcattggtcatacagtttctactaaactgaaaagcaaagaaattgaatat
tgtggccaacttcgcaacatttcaaaggatgccctccacaaggactttggaaaaaagatt
ggtgatcttttatggaactattgcagaggaattgataattcagttgttggttctgttcag
gaaacaaaatctgtgggtgccgaaatcaactggggagtcagatttaacgacaacaaagat
gctgagcattttcttaccaacctctgcaaggaggtgtctctacgcttgcagggctgtgga
gttcagggacgtactattacccttaaggtgaaaacaagaagggaaggtgctggagagcca
ataaagtatatgggatgtggtgactgtgaaaccacaagtcgatccatgacggtatggggc
tcacagattgcaggtgcaacagacagttttgtcactctccagagaattgcaaaacaatta
ttttcagctcttcgtcttgatgtgaaggaagttcgcggagttggattgtcaatgtcaaag
cttgagcatgcagatttagctcggggagcaccacaagggaatatgcttgaatcatggctt
gcttcaccagctgcaaaactcaagaaacgccgcggtgagatgttggggaatgttgatgtc
gcaggggctagcgtcctgcaggatttgagaagatctggaccattatctatggctgtgaca
tcacattcatcagaattgaaccttagaagtgataggtcttctggagctcataatgtcgag
ctgccgccattatcccaacttgatttggaggtcctgaagaacctgcctccggaaataatg
tctgaaatgaatgacatgtacaagggagaattgcaaggtctgctggacaccctcaataat
gataagggcaaggaaagtagttcaaagtctcttgctttgccagcagttactcagaactct
gtaccttctggtgatgcaaaccttcaaggatacagagatcacaaagactcgatgcattta
gaggaagatactaagggaaaatctgttaaacagctatcagaagttaaagcagccaatgat
gcttcatgctcaagagcctgtgaattagttcagagaacatcaaaatgtgttacacagctt
gatttgatgcctgattctctaagccaggcagatcttacagttctgcaggaattacctgag
gatgtgaaggctgatttgtttagcgcgcttccattacacagatcaggagatcctacatgc
aacgcttccaatgtttctgaaagtaaatctcctaatgtcagtggagctgaaaataaatct
cttaatgatggcagagctgatggcccaaaagacccaagaatttttctcccaccaggaagt
tctcagaaatggatcgaacggcttagagttagcagttgcccgattctgaatgtgattgca
gagcaacacacagattccagctgtagccgaccattatcttctattttagaacctgtagtt
tcattcctacctttgtgtccaacttcaggtagtgaagaatggaatgaaacactttcttgt
ctatccgagcttcttagacagtatatacaactgaaggttgaaactgacattgaagagctt
tacaaatgtttttgccttctgaaaaggtttgcttcagaatcagagttctttcgggaatta
cacgatagtattcttccttttctacaggattccgtcaaccaacattatggtgggacacta
catttctag

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