Panicum virgatum (switchgrass): 120668600
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Entry
120668600 CDS
T07260
Name
(RefSeq) cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like
KO
K14816
pre-60S factor REI1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120668600
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120668600
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GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_jaz
zf-met
Actin_micro
C2H2-zf_KIN17
Zn_SUZ12
DGOK
Motif
Other DBs
NCBI-GeneID:
120668600
NCBI-ProteinID:
XP_039804277
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Position
4N:47838550..47841771
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AA seq
404 aa
AA seq
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MPTVTCNACNAGFDDEEQQRLHYRSEWHRYNLKRKVAGVPGVTEALFLARQAALAEGNKP
ASAPMLYSCALCGKEYRSSKAHAQHLNSRSHLLRASQEPNASIAGITIVKPLPERVPRRA
PSAVDEDEDEDEEEEWVEVDPNEMELADESTSNMQVDEQSSKSDDDMDDLEELDISLCFM
CDLKHDTIEDCMVHMHKKHGFFIPDSEYLKDPSGLLTYVGLKVKRDFICLYCNDRCQPFL
SLEAVRKHMDAKGHCKLQYGDGGDDEDADLEDFYDYSSSYVDVEGKQLVAADDANSNFEL
GSGGSELVITNKSEKGTRVRTLGSREFIRYYRQKPRPSVATDRALALSLASSYKSMGLVT
VQSKEQMVRLKVLRAMNRTGVETMRTKIGMKSNVIRNLPKNCPY
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccgacggtgacctgcaacgcgtgcaacgcggggttcgacgacgaggagcagcaaagg
ctccactaccgctccgagtggcaccgctacaacctcaagcgcaaggtggctggagttcct
ggtgtgaccgaagctctgtttttggctagacaagctgctttagcggaggggaacaagcct
gcaagcgcccctatgctatacagctgtgctctctgtggcaaggagtacaggagctccaaa
gctcatgcacagcatcttaactcgcgatcacatcttctgagagcctctcaggagcccaat
gcctcaattgctggaattactatagtcaagccacttcctgagcgagttccacgtagagct
ccatctgcagtagatgaggatgaagatgaagatgaggaggaagagtgggttgaagttgac
ccaaatgaaatggagttggctgatgagtctacttcaaacatgcaagtagatgagcagtca
tccaaatctgatgatgatatggatgatcttgaagagttggatatctcgttgtgtttcatg
tgtgatctcaagcatgacacaatagaagactgcatggtccatatgcacaagaagcatggt
tttttcataccggacagtgaatacttgaaggatcccagtggtcttcttacttatgttgga
ctgaaggtgaagcgtgattttatctgcctctactgcaatgacagatgccagcccttccta
agtctagaggctgtcaggaaacacatggatgcaaagggtcactgcaaattgcagtatggg
gatggtggagatgatgaagatgctgaccttgaggatttctatgattacagcagcagttat
gttgatgtggaaggcaagcagttggttgctgctgatgacgctaacagcaactttgagctg
ggaagtggtgggtctgagctagtaataacgaacaagagtgagaaaggaactcgtgtcaga
actcttggttctagggaatttatccgctactaccgccagaagccacggccttctgttgcg
acggatcgtgctcttgcactttcactggcttccagctacaagagcatgggcctggtaaca
gttcagtctaaggagcagatggtaaggctgaaggttctccgggcaatgaacaggactggg
gtcgagacgatgcgaaccaagattggtatgaagagcaatgtgatcaggaacctcccaaag
aactgcccatattag
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