Panicum virgatum (switchgrass): 120668634
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Entry
120668634 CDS
T07260
Name
(RefSeq) ubiquitin-like protein ATG12 isoform X1
KO
K08336
ubiquitin-like protein ATG12
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
120668634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120668634
04121 Ubiquitin system [BR:
pvir04121
]
120668634
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120668634
Membrane trafficking [BR:
pvir04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
120668634
Ubiquitin system [BR:
pvir04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitin-like proteins (UBLs)
120668634
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120668634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG12
Motif
Other DBs
NCBI-GeneID:
120668634
NCBI-ProteinID:
XP_039804310
LinkDB
All DBs
Position
4N:48113695..48116039
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AA seq
122 aa
AA seq
DB search
MAAEVDQKVVVHVRSTGDAPILKQSKFKISGRDKFLKVIEFLRRQLHQDTLFVYINSAFS
PNPDELVIDLYNVRFLPKMYLHQFFLNLYSKIDVSAYFFCITLLQHLIVLEFPLVTSANN
DH
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggaagtggatcagaaagtggtggtgcacgtgcgatcgacgggtgatgccccg
atactgaagcaatccaaattcaagatttcgggacgagataaatttttgaaggtcattgag
tttcttcgccgacaacttcatcaggatacactgtttgtctatatcaacagtgcattttcg
ccaaacccagacgaactggtaattgacttgtataacgtaagattcttaccaaaaatgtac
ttacaccaatttttcttgaatctttactcgaaaattgatgtctctgcatattttttttgt
atcactttgttacaacatctaatagttcttgagtttcctttagttacttctgcaaacaat
gaccactga
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