KEGG   Panicum virgatum (switchgrass): 120668645
Entry
120668645         CDS       T07260                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03020  RNA polymerase
pvir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120668645
  09124 Replication and repair
   03420 Nucleotide excision repair
    120668645
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvir03021]
    120668645
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120668645
Transcription machinery [BR:pvir03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     120668645
  RNA polymerase III system
   RNA polymerase III
     120668645
  RNA polymerase I system
   RNA polymerase I
     120668645
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120668645
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG DTP-pb9_B-dom
Other DBs
NCBI-GeneID: 120668645
NCBI-ProteinID: XP_039804323
LinkDB
Position
4N:complement(48181783..48184698)
AA seq 144 aa
MVEYLLDDNFSVSRLDPDGKKFDRVTRIEAHNEQMHMQLDIATEIYPMRVGDKFNMVLAP
TLNLDGTPDTGYYTQAGRKTLADKFDYVMHGKLYKISEDSSTSSSTKVEIYASFGGLLML
LRCDSSSAASFQLDQRLFLLIRKV
NT seq 435 nt   +upstreamnt  +downstreamnt
atggttgagtacctcttggacgataacttcagtgtgagcaggctcgatcctgatggcaag
aagtttgacagagtcactcgcatcgaagctcataatgagcagatgcacatgcaactagat
attgctactgagatttacccgatgcgtgtcggtgacaagttcaacatggtgttagctcct
actctgaatctggatggaacaccagacactggctactacacacaggctggaaggaaaaca
cttgctgacaagtttgactatgtcatgcatggaaagctttacaagatctcagaagacagt
tccaccagctcatctactaaagtggagatctatgcctcttttggtggcctcctgatgctg
cttaggtgtgatagttccagtgcagctagcttccagctggatcagaggctgtttcttctt
atcagaaaggtgtaa

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