Panicum virgatum (switchgrass): 120668665
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Entry
120668665 CDS
T07260
Name
(RefSeq) disease resistance protein RPM1-like
KO
K13457
disease resistance protein RPM1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120668665
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GFIT
Motif
Pfam:
NB-ARC
WH_DRP
Rx_N
AAA_16
AAA_22
NPHP3_N
AAA_14
Motif
Other DBs
NCBI-GeneID:
120668665
NCBI-ProteinID:
XP_039804339
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Position
4N:complement(48315495..48320901)
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AA seq
593 aa
AA seq
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MADGLFVVLRKVALTLGDRMLEKIGYQVVEAAPIMTDFEHSMKQIEGELSILQAFIHQVS
AQRAGDKAFDAWLDQVRDVAHEVEDIIDEYAYLTVQAVDTSSFIKRKFHQIKNIAAWQKF
PSQISHVEARIQRLAEMRNRYGFSVSEQDTNNNLQVSDQLCLSDSAYLIDNSEIVGNADE
IGKLTQCLLEEKQDRTLIAILGMGGLGKTVIASSLYKNQKIRTYFDCHAWVTVSQTYQIE
ELLREIINQLIDQKSSIASGFVTMRSMRLIEVIQNYLRDKKYFIVLDDVWDKDAWLFLNY
AFVRNKCGSKVLITTRRKDVSSLAVDNYVIELRTLPCDESWKLFCTRAFHASKDNICPEN
LTTLAEKIVSKCQGLPLAIVTIGSALSYHELKEQEWEFFYNQFSWQLAYNPELTWISNVL
NMSMHDLPSHLRSCFLYCSLYTENYKIERKLISKLWIAEGFVEDRGDGTTLEDVANFYLT
ELTQRSILQVTERNTWGRATTFVMHDLVREATLNIAKKEKFGIAYSDASVTRVTHEAHRL
SIQRGAQSLHSLSSSQLRSFILFDTEVPSWIYDVLSCFRLLTTEGPLPKIFQY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgggctttttgttgttctcagaaaagttgctcttaccttgggagataggatg
ctagagaagattggctaccaggtggttgaagcagcaccaatcatgacagattttgagcat
agcatgaaacaaattgagggcgaactttcaattctgcaggcctttatacaccaagttagt
gcacaaagagctggtgacaaggcatttgatgcatggttggaccaagttagagatgttgct
catgaggttgaagacatcattgatgagtatgcttaccttactgtgcaagctgtggataca
agcagcttcatcaagagaaagttccatcagatcaagaacattgcagcatggcagaagttc
cctagccagatcagtcatgtagaagctcgaattcagaggctagcagaaatgagaaatcga
tatggcttctcggttagtgaacaggacacgaataacaatttgcaggtctctgatcagctt
tgtctgtcagattctgcttacctaatagataactctgagatagtgggaaatgctgatgaa
attggaaaattgacccaatgcctacttgaggagaagcaagatcggactctgattgccatc
cttggtatgggaggtttagggaaaactgttatcgccagcagtttgtacaagaatcagaag
ataagaacatattttgactgtcatgcctgggttaccgtgtctcagacttatcaaattgaa
gaattgctaagagaaatcataaatcaactgatagatcagaaatcaagcatagcaagtgga
tttgtgaccatgcgtagcatgagattaattgaggtaatacaaaactatttgcgggacaaa
aaatatttcattgtcctggatgacgtatgggataaagatgcctggctttttctgaactat
gcttttgtcagaaacaaatgtggaagtaaagtgctgataactacacggagaaaagatgtg
tcttctttggcagttgataactatgtcattgaacttagaactcttccatgtgatgaatct
tggaaattattctgtactagggcatttcatgcatcaaaagataacatatgccctgaaaac
ctcacgactttggcagagaaaatcgtttctaagtgtcaaggattgccactggctattgta
accattggaagtgctctatcataccatgaattaaaggagcaggagtgggaatttttctat
aaccaatttagctggcagttagcttacaatccagaactaacatggatctccaatgttctg
aatatgagcatgcatgatctcccaagccatctgaggagctgctttctgtactgcagcctc
tatactgaaaattacaagattgaaagaaaattgatttccaagctatggatcgcagaaggt
tttgtggaagacagaggagatggaacaacattggaagatgttgccaacttttaccttaca
gaactcactcagcgttctattcttcaagtcacagaaaggaatacatggggaagggctaca
acatttgttatgcatgatcttgtcagagaggcaaccttaaacattgctaaaaaggagaag
tttggaatcgcatatagcgatgctagtgtaacccgagttacccacgaagctcaccgctta
agcatccaaagaggtgcccagtccttacattctttatcgagttcgcaactccgttcgttc
atcttgttcgacactgaagtgccatcttggatatacgatgttttatcatgtttcagacta
ctgactactgagggtcctttgcctaagattttccaatattga
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