Panicum virgatum (switchgrass): 120668728
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Entry
120668728 CDS
T07260
Name
(RefSeq) delta-aminolevulinic acid dehydratase, chloroplastic
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00860
Porphyrin metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01240
Biosynthesis of cofactors
Module
pvir_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
120668728
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120668728
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
120668728
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120668728
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Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-GeneID:
120668728
NCBI-ProteinID:
XP_039804419
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Position
4N:complement(48746343..48750278)
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AA seq
426 aa
AA seq
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MASTVSFSPSNVQMFQGRSCHGHSAFGSCFAVPRAGPRLRSTAVRVSSEQEAAAAVRAPS
GRTIEECEADAVAGKFPAPPPLVRPKAPEGTPEIRPLDMTKRPRRNRKSPALRAAFQETS
ISPANFVLPLFIHEGEDDAPIGAMPGCYRLGWRHGLLDEVYKARDVGVNSFVLFPKVPDA
LKTPTGDEAYNDNGLVPRTIRLLKDKFPDIVIYTDVALDPYSSDGHDGIVREDGVIMNDE
TVYQLCKQAVSQARAGADVVSPSDMMDGRVGALRAALDAEGFHDVSIMSYTAKYSSSFYG
PFREALDSNPRFGDKKTYQMNPANYREALIETAADEAEGADILLVKPGLPYLDIIRLLRD
NSALPIAAYQVSGEYSMIKAGGALGMIDEQKVMMESLMCLRRAGADVILTYFARQAAGVL
CGMGSK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaccgtctccttctccccttccaacgtgcagatgttccagggtaggagctgc
cacggtcactcagcattcgggagctgcttcgctgttccaagagccgggccaaggctgcgt
tccacggccgtcagggtcagcagcgagcaggaggctgcggcggccgtaagggccccgtca
gggaggactatcgaggagtgcgaggccgacgccgtcgctgggaaattccctgctcctccg
cccttggttagaccaaaggctcctgaaggaacaccggagatcaggccccttgacatgaca
aagcgcccacgtcgcaaccggaagtcgcctgctcttagggctgcattccaggagacgagc
atctcacctgccaattttgtgctcccattgtttatccatgaaggagaagatgatgctcct
atcggagcaatgccagggtgctataggcttgggtggagacatgggcttcttgatgaggtt
tacaaggcacgtgatgttggtgttaacagtttcgtgctatttccaaaagttcccgatgca
ttgaagactccaacaggtgatgaagcatacaatgataatggactggttccacgtacaatc
cgcttgcttaaagacaaattccctgatattgttatctacactgatgttgcattggatcct
tattcatctgatggccatgatggtattgtgagggaagatggagtaattatgaatgatgaa
acagtttatcagttgtgcaagcaagctgtttcacaggctcgtgctggtgctgatgttgtc
agccctagtgacatgatggatggccgtgttggagcacttcgtgctgctcttgatgctgag
ggtttccatgatgtctccattatgtcctacacagcaaagtattccagttcattttatggc
ccattcagagaagctttagattcaaatccaagatttggagataagaaaacttatcagatg
aacccagccaactacagagaagccctcatagaaactgcagcagatgaggcagaaggagct
gacattcttctagtaaaaccaggattaccatacttggatatcatccgacttcttcgggat
aattcagcgctgcccattgctgcttaccaggtctcgggcgagtactcgatgatcaaagcc
ggcggggcgctgggcatgatcgacgagcagaaggtgatgatggagtcgctcatgtgcctt
cggcgtgccggcgctgacgtcatcctgacctacttcgcccgtcaggccgcgggcgtcctg
tgcggcatgggatccaagtag
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