Panicum virgatum (switchgrass): 120668730
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Entry
120668730 CDS
T07260
Name
(RefSeq) probable histone acetyltransferase HAC-like 1 isoform X1
KO
K04498
E1A/CREB-binding protein [EC:
2.3.1.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
pvir03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120668730
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120668730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120668730
03036 Chromosome and associated proteins [BR:
pvir03036
]
120668730
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120668730
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
120668730
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
Pocket domain CBP
120668730
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
120668730
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
120668730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_KAT11
zf-TAZ
PHD
zf-C4H2
ZZ
KIX_2
Motif
Other DBs
NCBI-GeneID:
120668730
NCBI-ProteinID:
XP_039804423
LinkDB
All DBs
Position
4N:complement(48759487..48769287)
Genome browser
AA seq
1574 aa
AA seq
DB search
MNVPGQMSGQPAQMNLGGGRGLQQHQPLQVASCHLDMDPQFLKMRSIMHRNIVDRLMKTQ
NFAENQSLEKIADRLEKFLYRQHPTKADYYAMLKEPIDPHLQVAVRAFSNHGGHQRQQMS
HQTPTSSRCGTMVPTPGISQSSMSDGYQDPSINVLQNSMAISDSSVMCPVGMQRQVAHMI
PTPGFSHHQLLSPNPAYSNGAGYLNGESNDIQQVHEQKPVPFSINQSSYSMQHLGTHVGS
GVHSRILEDSSPYGLSDPQINGDMGLPGPNMQLPYRTVGAKEFMNLPPYGNSPEKPLQQE
FICHLPRGTPTSSCVSGNFYGTVSSSSTPTGNQNMNAAQILSTSRMEFALLTSQTTQQPL
QPKSVIKSEVLDQTENVNIRKSHFPYQHQQQNYFEPNHRCSQFVKESELGSCRDEQLFNQ
EILPYDELMYSDKSNQTYRQYVSDNNIQVTMDSQQLLSSHVKDTELMNSMFQRTMSQDAA
EQHFSPDWLNTGCAMTPIDHKLSKLPSKGSEQATNKCYLQSRWPIMFIHANFCPGPFRGS
CKSQDCAHAQEILKHSNDCQVRDCLYGQCKQSKEAIYHYNNCVNKHCLICREAFESLSHY
CDQTSKQNTIERSINGAHGDRMGINMVAAETFDDQPPISKRLRLQPMPPNVFDCDDAYVP
QACPNFVSQQAHPKHLGQDRRIFPKQEQNIEIDIQPPQRVEIIGSGTIGKTSAIQSYEIP
GVSNGVSNELDSHIKKENWLPNKDTNESALDIKDSANGSTNAMMPNIEKTKRKGISLMEL
FTPDQIYEHVRSLRQWVGQSKAKAEKNQVIGHSENLNSCQLCKVEKLFFEPPPKYCSSCG
ARIKRNAPYYSGSITESGSYYFCVPCYSESRSESILVNNIQLLKTKLAKKRNDDELEEAW
VACDKCKRWQHQICALFNAKRNDEEKDAEYICHSCYIQEIENGMRTPLPQNTIPGAKDLQ
RTVLSDHIEERLFQRLKEERQNRANKYGKKFDEVPGAEGLVVRVVSSVDKKLEVKPHFLE
IFREENYPAEFPYRSKAILLFQRIEGVEVCLFGMYVQEFGAECAFPNQRWVYLSYLDSVK
YFRPEIETVSGEALRTFVYHEILIGYLQYCKQRGFTSCYIWACPPFKGEDYIMYCHPEIQ
KTPKSDKLREWYLSMLRKATNEGIVVELTNLYEHFFNPKTDCKAKVTAARLPYFDGDYWP
GAAEDIINQICLPEDDRNLQKKGKLKKTITKRSLKLAGITDLSGNASKDAMLMQKLGEAI
YPMKEDLITVHLQYSCHHCCIPMVSGRRWVCNQCKSFYICDKCYNVEEQHEEKERHPSNS
TDFHILHPVEIDGVPKDTKDRDGILESEFFDTRQAFLSLCQGNHYQYDTLRGAKHSSMMV
LYHLHNPTEPAFVTTCDICKNDIRTGQGWRCKECDYDECAACYKHNEGANHVHKLTKHPA
GSDMDAQQKKSVETTEILLQLLAHAGSCPARGGCHYPNCRKLKSLFHHGAQCKIRSSGGC
RLCKKVWSFIQLHARVCKESQCNMPRCRDQKELWRKLQLMQWQSESRRRAAVNQMMMQRQ
LESSNRAAGNGVNV
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgcctgggcagatgtcggggcagccagctcagatgaacttaggtggcggcagg
gggctgcagcagcaccaacctctgcaagttgcttcgtgccaccttgacatggatcctcag
ttcttaaaaatgcgcagcatcatgcaccggaatatagttgatcggcttatgaagacacag
aattttgctgagaaccagagccttgagaaaattgcagataggttagagaaatttttgtac
agacagcatccaacaaaggctgactactatgcaatgctgaaagaaccaatcgacccacat
ttgcaagttgctgttagggccttctcgaaccatggtggtcatcagcgtcaacaaatgtcg
catcagacaccaacttcctcccgctgtggcacaatggttccaacacctggtatctctcaa
agttccatgtccgatggataccaggatccatccatcaatgtactacaaaattccatggct
attagtgactcgtcagtgatgtgtccagtgggtatgcaacgacaggtagctcatatgatt
ccaactccaggatttagccatcatcagcttttatctcccaatcctgcttactcaaatgga
gctggatacctcaatggggagtcgaatgacatacaacaagtgcacgagcagaaaccggtg
ccattttctatcaaccaaagtagctattcaatgcagcatctaggtacccatgtcggttct
ggagtacattcaagaatattggaggattcctccccatatggtttgtcagatccacaaatc
aatggtgatatgggtttgcctggcccgaatatgcagctaccatacagaactgtaggagca
aaagaatttatgaatttacctccttatggcaattcaccggaaaaaccgctgcagcaagaa
ttcatttgtcatctcccacggggaacaccaacatcttcttgtgtttctgggaatttttat
ggcaccgtttcttcaagttcaacacctacaggtaaccagaacatgaatgctgcacaaata
ttatccacttcaagaatggagtttgctttgcttacaagtcagacaacccagcaaccgctt
caaccaaaatctgttataaaatctgaggtattggatcaaacagaaaatgtgaacattagg
aaatcacacttcccgtaccaacatcagcagcaaaattatttcgagcctaatcatcgttgt
tcccagtttgtgaaggaatcggagcttggttcttgtcgtgatgagcaactatttaatcaa
gaaattttaccatatgatgaattaatgtattcagacaaaagcaaccagacgtatcgacaa
tacgtttctgataataacattcaggtcactatggattctcagcagttattatcttcacat
gtgaaagatactgaactgatgaatagtatgtttcagagaaccatgtcacaagatgcagca
gaacaacatttttcacctgattggctcaatactggttgtgctatgactccaattgatcac
aaactatccaagcttccatcaaaaggatctgaacaggcaacaaataaatgctatctacaa
tcacggtggccgatcatgttcattcatgcaaatttttgtccaggtccttttagaggtagt
tgtaaatcacaagattgtgctcatgcgcaggagatattgaagcattctaatgactgtcaa
gtaagagattgcttgtatggtcaatgtaaacaatcaaaagaggctatttatcactacaat
aattgtgtcaataagcattgtcttatatgtagggaagcatttgaaagtctgagccactat
tgtgatcaaacaagcaagcagaatacaattgaaaggagtatcaatggggcacatggtgac
agaatgggcatcaacatggtggcagctgaaacctttgatgatcaaccacctatatcaaag
aggttaaggttgcaacctatgcctcctaatgtgtttgattgtgatgatgcctatgttcct
caagcatgcccaaattttgtgtcgcagcaagctcatcctaagcatcttgggcaggataga
aggatattcccgaaacaagagcaaaacattgagattgatatacagccaccgcaaagggta
gagataattggatctggtactattggtaaaacaagtgcaattcaaagttatgagattcct
ggtgtttcaaatggtgtttcaaatgagctagattctcatatcaagaaagaaaattggttg
cccaataaagatacaaatgaaagtgctctagatattaaggatagtgcaaatggctctaca
aatgccatgatgcccaacatagagaaaacaaagagaaaaggtatttcactcatggaattg
ttcactccagatcaaatatatgaacatgtccgtagtctaagacagtgggttggtcagagt
aaggctaaagctgaaaagaatcaagtaataggacattccgagaacttgaactcatgccag
ctttgcaaagtagaaaagcttttctttgaacctccacctaaatattgttcttcttgtggt
gctcggataaaacggaatgcaccatattatagtggttctatcactgaaagtggttcctac
tatttttgtgtaccatgttacagtgagtctcgcagtgaatcgattttagtgaacaacatt
caactgctcaagacaaaacttgcaaaaaaaagaaacgatgatgagcttgaagaagcatgg
gttgcatgtgacaaatgtaaacgctggcagcaccagatttgtgctctttttaatgccaaa
aggaatgatgaagaaaaagatgctgaatatatttgccatagttgttatattcaagagata
gaaaatggcatgcgcacacctttaccacagaataccattcctggggcaaaagatctgcag
aggacagtacttagcgatcatattgaagagcgcctttttcaacgcctcaaagaggagaga
cagaacagggccaacaaatatgggaaaaaattcgatgaggttcctggagcagaagggctt
gttgtcagagttgtttcatcagtggacaagaaactggaagttaaaccacattttttggag
atttttcgagaagagaattacccagcagagtttccttacaggtccaaggccattctttta
tttcagagaatagaaggtgtggaagtatgcctatttggcatgtatgtgcaagaattcgga
gcagaatgtgcattcccaaaccaacgctgggtttatttgtcgtaccttgattctgtcaaa
tactttagacctgagattgaaactgtttctggtgaagctttacggacgtttgtctaccat
gaaattctgataggttatctccagtattgtaagcagcgggggttcaccagttgttacata
tgggcgtgcccacctttcaaaggtgaagattacattatgtattgccatccagagattcag
aagacaccaaagtccgacaaactgcgagaatggtacttatctatgcttcggaaagctact
aatgagggtatagttgttgagctgaccaatctatacgagcacttttttaaccccaagaca
gattgcaaggctaaagtgaccgcagctcgcttgccatattttgatggtgattattggcct
ggagctgcagaagatataatcaaccaaatttgccttccagaagatgacagaaatctgcag
aagaagggaaagttaaagaagactatcacaaaaagatctttgaaacttgctggtattact
gatttaagtgggaatgcttcgaaggatgctatgctcatgcaaaagctcggagaagccatt
tacccaatgaaagaagatctcatcacggtccatttgcaatattcttgccatcactgctgt
atccctatggtgtccggaagacgttgggtctgcaatcaatgcaaaagcttttatatctgt
gacaagtgttataatgtagaagaacagcatgaagagaaggagaggcacccgagtaatagt
actgacttccatatattgcatcctgttgaaattgatggggtgcctaaagataccaaggac
agagatggcatcttagaaagtgaattttttgacaccaggcaggcattcctgagtctctgt
caaggaaaccattatcaatatgatacccttcgcggtgcaaagcattcctcaatgatggtg
ctataccatcttcataatccaactgaacccgctttcgttaccacatgtgatatctgcaag
aacgatatcagaactggtcaaggatggcggtgcaaagaatgcgattatgatgagtgtgct
gcttgctacaaacacaatgaaggggccaatcatgtccacaagttaactaagcatccagca
ggatcagacatggatgctcaacaaaagaagagtgttgaaacgacagagatattgcttcaa
cttttggcgcacgcgggatcttgcccagctcgtggtggttgccattatcccaactgtcga
aaattgaagtcactcttccatcatggagcacagtgcaagatacgttcatcaggaggctgt
cgtctgtgtaagaaagtgtggagctttattcaactccatgccagagtgtgcaaagaatca
caatgcaatatgccaagatgcagggatcagaaagagctttggagaaagctgcaactgatg
caatggcagtctgagtcccggaggcgtgctgccgtcaaccaaatgatgatgcaacggcag
ttggagtccagtaaccgggctgcaggaaatggtgtgaatgtgtaa
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integrated database retrieval system
