Panicum virgatum (switchgrass): 120668733
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Entry
120668733 CDS
T07260
Name
(RefSeq) anthocyanin regulatory C1 protein-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120668733
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120668733
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120668733
NCBI-ProteinID:
XP_039804434
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Position
4N:8441413..8442579
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AA seq
264 aa
AA seq
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MGRRACCAKEGMKRGAWTSKEDGILAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNY
LRPNIKRGNISDDEEDLIVRLHKLLGNRWSLIAARLPGRTDNEIKNYWNSTLGRRVGAGG
SRAVVAGKPDAPAASGAGSCETGQKGAAAAPRAGPDSAGSAAAETAVRAPKAVRCRAGSL
LFFHSDQDTPPAGETPTTGGGAGGPGEGPDDCSSSAASTFAAGVDEQPCFSGSGDWMDDV
RVLESFLENDDEWVMCQVTDEHLA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggggaggagggcgtgctgcgccaaggaagggatgaagagaggggcgtggacgagcaag
gaagatggcatcttggccgcctacgtcaaggcccacggcgaaggcaaatggagggaggtc
ccccaaaaagccggtctgcgccggtgcggcaagagctgccggctgcggtggctcaactac
ctccggccgaacatcaagcgcggcaacatctccgacgacgaggaggacctcatcgtccgc
ctccacaagctcctcggcaacaggtggtctctgatcgcagccaggctgccgggccgaaca
gacaatgaaatcaagaactactggaacagcacgctcggccggagggtcggcgccggcggc
agcagggccgtcgtcgccggcaagccggacgccccggcggcgtcgggcgccggcagctgc
gagaccggccagaagggcgccgccgccgctcctcgcgcgggccccgactcggctggctcc
gccgccgccgagacggccgtgagggcgcccaaggccgtgcggtgcagggccggcagcctg
ttattcttccactcggaccaggacacgccgcccgcgggcgagacgccaacgaccggggga
ggagcaggagggccaggagaaggaccggacgactgcagcagctcggcggcgtcgaccttc
gcggcgggcgtcgacgagcagccgtgcttctccggcagcggcgactggatggacgacgtg
agggtcctggagtcgttcctcgagaacgacgacgagtgggtcatgtgccaggtgaccgac
gagcatctggcgtag
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