Panicum virgatum (switchgrass): 120668744
Help
Entry
120668744 CDS
T07260
Name
(RefSeq) protein DETOXIFICATION 16-like isoform X1
KO
K03327
MATE family, multidrug and toxin extrusion protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120668744
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
120668744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
TMEM100
Motif
Other DBs
NCBI-GeneID:
120668744
NCBI-ProteinID:
XP_039804452
LinkDB
All DBs
Position
4N:complement(48879937..48883733)
Genome browser
AA seq
486 aa
AA seq
DB search
MGGAAESSTSAATAASSPLLLPRAPPRAAVGAEVRRQVELAAPLVACSLLQYSLQVVSVM
FAGHLGELSLSGASVAASFANVTGFSVLLGMGSALDTFCGQSYGARQYNMLGTHAQRAII
VLMFMGVPLAFILAFTGQILISLGQNPEISSEAGLYAQWLIPGLFAYGLLQCVTRFLQTQ
NIVQILVVCSGLTLLLHIMLCWFLVQTFGLGHKGAALAISISYWFNVALLAIYIKVSEAG
RRSWKGWSREALSLKDVKEYMRLAIPSTFMTCLEYWAFEMVVLLAGFLPDPKLETSILST
SLNTMWMVYTIPSGLSSATSIRVSNELGAGNPQAARLSIYISGIMCLTEGLFIAIITIWV
RNIWGYLYSNEKEVVKYVSMMMPILATSDFMDGIQCTLSGAARGCGWQKVCSLINLFAYY
AIGLPSAVTFAFVLKIGGMGLWLGIICAMAVQIFALIVLILRTSWDEEAEKAQARVRCSD
GSITSA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgcggcggagtcgagcacgtcggccgccacggcggcgtcctcgcctctcctc
ctgccccgcgctcctccgcgcgccgcggtgggggcggaggtgcggcggcaggtggagctc
gcggcgccgctggtggcctgcagcctgctccaatacagcctgcaggtggtctccgtcatg
ttcgccgggcacctcggcgagctctcgctctccggcgcctccgtcgccgcctcctttgcc
aacgtgaccggcttcagcgtcctgctgggtatgggaagcgcactggataccttttgtgga
caatcatatggagcaagacaatataatatgcttgggacacacgcacaaagggctataatt
gttcttatgtttatgggtgtgcctctggcctttattttggccttcactggtcaaatcctt
atttctcttggtcaaaatcctgaaatatcatctgaagctggactgtatgctcagtggttg
attcctggtcttttcgcatatggcttgcttcagtgcgtcaccagattcctgcagacccaa
aatattgtccaaatattggtagtttgctctggacttactttgctacttcacattatgcta
tgctggttcctggttcaaacatttggccttggtcacaaaggtgcagctttggcgatctca
atatcttattggttcaatgtggcattgctagcaatatatattaaagtctctgaagctggc
agaaggagttggaaaggatggtctagggaggcactaagtttaaaggatgtcaaagaatat
atgaggctagccattccatctacttttatgacctgcttggagtattgggcatttgagatg
gtggttctcctagcaggatttcttccagatccaaaactggaaacttcaattttgtccacc
agcctaaacacaatgtggatggtttatacaattccaagtggcctcagcagtgcaacaagt
attagagtttcgaatgaattaggtgctgggaatccacaggcagcacgcctatccatttat
atttcaggaatcatgtgcctaactgaaggcctttttatagctatcatcactatatgggtg
cgaaatatctggggttatttatacagcaacgaaaaagaggttgtgaagtatgtgtcgatg
atgatgccaattcttgctacttctgacttcatggatggaatacaatgcacgctatcagga
gcggctcgaggatgtggctggcagaaagtatgttcacttatcaacttgtttgcttactat
gctatcggtctcccttcagctgttacttttgcatttgttctgaagattggtggcatgggc
ctttggttgggaattatatgtgcaatggcagtgcaaatatttgctttgatcgtgttgata
cttcgaaccagctgggatgaagaggctgaaaaggcccaggctagagttcggtgttcagat
ggaagcataacatcagcctga
DBGET
integrated database retrieval system
