Panicum virgatum (switchgrass): 120668851
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Entry
120668851 CDS
T07260
Name
(RefSeq) DDB1- and CUL4-associated factor 8-like
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120668851
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
120668851
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WDR55
EIF3I
Beta-prop_EML
NBCH_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
120668851
NCBI-ProteinID:
XP_039804580
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All DBs
Position
4N:complement(49696601..49700849)
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AA seq
488 aa
AA seq
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MPLERKRMAGLWEREVGGLPPRSFANAVMASKDFVQSLRIQKRLRKHRGCVNTISFNADG
RLLLSGADDRTVVLWNWVEAVPTLSFHTGHCNNVLHAQFMPFSDDRSVVTCAADGEVRHS
QIREGGRATTDKLVELEFAIHRLAVEPGSPYTFYCCGEDSSVWLFDLRGKNAMELFRCRA
AYHAPADATELFAIAIDPRKPCCFAVAGSDEYVRIYDTRKLRMDGNSIFGDPTEHFCPPH
LIGENKDGITGLAYSQTSELLASYSHDNIYLFSREHGLHFNNIEVNEQLLMDGTKPLSCR
DELPIPKTFKGHQNQHTIKGVNFLGPNCDYVTSGSDCGRIFIWRKKDGELIRVMTGDKNI
VNCVEQHPSGIVVASSGIDNDIKIWEPGEGENPSIAPVDKVEEDMWLSSSSDSDGFFYND
DLEYAMDLDGIYVYGNGDEHSSEEDEDTSSEEDDGGDNSAKEDDDGDNSGSGEEGADGEN
SAEDVSDG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgccgctggagaggaagaggatggccgggctgtgggagcgcgaggtcggcggcctccct
cccaggagcttcgccaacgccgtcatggcctccaaggacttcgtgcaatctctcaggata
cagaagaggctacggaagcacaggggctgcgtcaacactataagcttcaacgcggacggg
agattgctcctctccggggcggacgatcggaccgtcgtgctgtggaactgggtggaggcg
gtgccaaccttatcgttccacactgggcactgtaacaacgtgctccacgcgcagttcatg
cccttctcggatgaccggagcgttgtcacgtgtgctgccgatggtgaggtgaggcattca
cagatacgggaaggtgggcgtgcaactacagacaaacttgttgagttggagtttgcgata
cacaggttggctgttgagccaggaagtccttacacattctactgctgcggtgaagatagc
tccgtgtggctttttgacctcagggggaaaaatgccatggaactctttagatgtagggct
gcataccatgcccctgctgatgccactgaactctttgctattgccatagacccaaggaag
ccctgttgttttgcagtggctggatcagatgagtatgtaaggatatatgatacccgcaag
cttcgtatggatggcaattctatttttggtgacccaacggagcacttctgccctccacat
ttgattggtgaaaacaaagatggaataactggtttggcttactcacagaccagtgagctg
ttagcatcctatagtcatgacaatatctaccttttctcaagagagcatggtttacacttc
aacaacattgaggtaaatgaacaactcctgatggatgggaccaaacccttatcttgtagg
gatgagttgcctatacctaagacattcaagggacaccagaaccaacacaccattaagggg
gttaacttccttgggcccaactgtgattatgttacctccgggtcagactgtggccgtata
tttatttggagaaagaaggatggggagctgatcagagtgatgactggagataaaaacatt
gtaaactgtgtcgaacagcacccttcagggattgttgttgcaagcagtggcattgataac
gatattaagatttgggaacctggtgaaggtgaaaacccctccatcgctcctgttgacaag
gttgaggaagatatgtggctctccagcagcagtgattctgatggctttttttacaacgac
gatttggaatatgcaatggacttagatggtatctatgtatatggaaatggtgatgaacat
tcatctgaggaagatgaagatacatcatcagaggaagatgatggtggtgataatagtgcc
aaagaagacgacgatggtgacaatagtggctcaggagaagaaggtgctgacggtgaaaac
agtgccgaagatgtaagcgatggttga
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