Panicum virgatum (switchgrass): 120668891
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Entry
120668891 CDS
T07260
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic-like
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120668891
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120668891
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
120668891
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120668891
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
120668891
NCBI-ProteinID:
XP_039804627
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Position
4N:complement(49946930..49953323)
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AA seq
825 aa
AA seq
DB search
MLCITSPSSSPAPLQPARRSRALSDRAAPPRIAGGGNVRLSVLSVQREARRPGPAKAKSK
FATAVTVQEDKTMAASKDNVDHLPIYKLDPKLEEFKDHFSYRMKRYLDQKCSIEKNEGSL
EEFSKGYLKYGINTNKDGTVYREWAPAAQEAQLIGDFNDWNGANHQMEKDQFGVWSIKID
HVKGKPAIPHNSRVKFRFRHGAVWADRIPAWIHYAAVDASKFGAPYDGVHWDPPASERYM
FKHPRPSKPDAPRIYEAHVGMSGEKPAVSTYREFADNVLPRIRANNYNTVQLMAVMEHSY
YASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLMDVVHSHASNNVTDGLNGYDV
GQSTQESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNLRYWMDEFMFDGFRFDGVTSM
LYHHHGINVGFTGNYKEYFSLDTDVDAVVYMMLANHLMHKILPEATVVAEDVSGMPVLCR
PVDEGGVGFDYRLAMAIPDRWIDYLKNKEDSEWSMGEIAHTLTNRRYTEKCIAYAESHDQ
SIVGDKTIAFLLMDKEMYTGMSDLQPASPTIDRGIALQKMIHFITMALGGDGYLNFMGNE
FGHPEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMDAFDQAMNALDEEFFFLSSPKQ
IVSDMNEEKKVIVFERGDLVFVFNFHPKKTYDGYKVGCDLPGKYRVALDSDAFVFGGHGR
VGHDVDHFTSPEGVPGVPETNFNNRPNSFKVLSPPRTCVAYYRVDEEAETTGAGKTSPEI
IDVDATPLKTPTATTEAHEERESTEDVSSKKGRQFGRQSSDKSTK
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcatcacgtcgccgtcttcctctcccgctcctctacagcccgcgcggcgctcg
cgcgcgctttctgatcgagcggcgccgccaaggatcgcgggtggcggcaatgtgcgcttg
agtgtattgtctgtccagcgcgaggctcgccgaccggggccggcaaaggccaagagcaaa
ttcgccactgccgtgactgtgcaagaagataaaactatggcagcttccaaggacaatgtc
gaccatcttcccatatataagctggaccccaagttggaggaattcaaggaccatttcagc
taccggatgaaaagatacctggaccagaaatgttccattgagaaaaatgaggggagtctt
gaagaattttctaaaggctatttgaagtatgggatcaatacaaacaaggatggaactgta
tatcgtgaatgggcacctgctgcacaggaggcacagcttattggtgacttcaatgactgg
aatggtgcaaaccaccagatggagaaggatcaatttggtgtttggtcaattaaaattgac
catgtcaaagggaaacctgccatccctcataattccagggttaaatttcgctttagacat
ggtgcagtatgggctgatcgtattcctgcgtggattcattatgcagctgttgatgcctct
aaatttggagctccctatgatggtgttcattgggatcctcctgcttctgaaagatacatg
tttaagcaccctcggccttcaaagcctgatgctccacgtatctatgaagcccatgtgggg
atgagtggtgaaaagccagcagtaagcacatatagggaatttgcagacaatgtgctgcca
cgcatacgagcaaataattataatacagttcagttgatggcagttatggaacattcttat
tatgcttcgtttgggtatcatgtgacaaatttctttgcagttagcagcagatcaggcaca
ccagaggaccttaaatatcttgttgataaggcacacagtttgggattgcgagttctgatg
gatgttgtccatagccatgcaagtaataatgtcacagatggtttaaatggctatgatgtt
ggacaaagtacccaagagtcctattttcatacaggagataggggctatcataaactttgg
gatagccgtctgttcaactacgctaactgggaggtattgaggtttcttctttctaaccta
agatattggatggatgaattcatgtttgatggcttccgatttgatggagttacatcaatg
ctgtatcatcaccatggtatcaatgtgggatttactggaaattacaaggagtatttcagt
ttggacacagatgtggatgcagttgtttacatgatgctcgcaaaccatttaatgcacaaa
atcctgccagaagcaactgttgttgctgaagatgtttcaggcatgccagtcctttgtcgg
ccagttgatgaaggtggagttgggtttgattatcgcctggcaatggctatccctgataga
tggattgactacctgaagaacaaagaagactctgagtggtcaatgggtgaaatagcgcat
actttgactaacaggagatatactgaaaaatgcattgcatatgctgagagccatgatcag
tctatcgttggcgacaaaactatagcatttcttctgatggacaaggaaatgtacactggc
atgtcagacttgcagccggcttcacctaccattgatcgtgggattgcactccaaaagatg
attcatttcatcacaatggctcttggaggtgatggctacttgaattttatggggaatgag
tttggtcacccagaatggatcgactttccaagagaagggaacaactggagctatgataaa
tgcagacgtcaatggagccttgtggacactgatcacttgcggtacaagtacatggatgcg
tttgatcaagcaatgaatgcgctcgatgaggaatttttctttctttcatcaccaaagcag
attgtaagcgatatgaatgaggagaaaaaggttattgtattcgaacgtggagatttggtt
tttgttttcaattttcatcccaagaaaacttatgatgggtacaaagttggatgcgatttg
ccggggaaatacagagtagcactggattctgatgcttttgtctttggtggacatggaaga
gttggccatgatgtggatcacttcacgtcgcctgaaggggtaccaggagtgcctgaaaca
aacttcaacaaccgcccaaactcattcaaagtcctttctccaccccgcacttgtgtggct
tactaccgtgtggatgaagaggctgagacaactggtgctggaaagacttctccagaaatc
attgatgtcgatgcaacccccctcaaaacacctacagctactacagaagcgcatgaggaa
agagaatcgacagaggatgtttctagcaagaagggaaggcagtttgggcgtcagtcgtcc
gataaaagtacgaaatga
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