Panicum virgatum (switchgrass): 120668898
Help
Entry
120668898 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 3
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120668898
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120668898
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120668898
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120668898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120668898
NCBI-ProteinID:
XP_039804637
LinkDB
All DBs
Position
4N:complement(50009836..50013048)
Genome browser
AA seq
695 aa
AA seq
DB search
MASSSTAASSSAAAAAYPRTPFSLRRRPGLLAFLFVFLCFISFQVVIHVPSARSAVSQWL
FSGHQGEHQRPKNCPGCGNSQDVGSADKTIAYTDQYGRIKLFKVTAREFASSSIWENPWL
PRDSQPIARTQEAAEDLLLANGSEATNLSSAETLETKSVDPIKLKRQVFRRRRKEQRVQE
LLQVDKKVELEMRNAAINSSRNFDNKVRGSYNIWRPEFRLTNTDSTLRLMKDQIIMAKLY
ATIALSQKEPDMYALLMKCIKESQTAIGDALIDSELDSSALERAKAMGHVLSSARDVLYS
SSEVSRKLRVMLQSTELDIDAVKKQNSFLVQHAAKTVPMPLHCLHMQLTTDYYFRDGVTK
EHFHDAALKEEENKAKLEDRSLYHYAIFSDNVLAASVVVRSTVTNANEPEKHVFHIVTDR
LNFAAMKMWFIAHPPQLAIVHVENIDNFKWLNSSYCSVLRQLESARLKEYYFKAHDPSSL
SDGNENLKYRNPKYLSMLNHLRFYMTEIHPMLDKILFLDDDIVVQKDLTPLWDIDLKGMV
NGAIETCKESFHRFDTYLNFSHPKISENFDPRACGWAFGMNMFDLKEWRKRNITGIYHYW
QDLNEDRKLWKLGTLPPGLITFYNLTYPLNRTWHVLGLGYDPAVDIAEIDNAAVVHYNGN
YKPWLDLAISKYNPYWSKYVDLGSSHVQHCYASKQ
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctcctccaccgccgcctcctcgtcggcggcagcggcagcgtatcccagaacc
cccttctccctgcggcggcgcccgggtctcctcgccttcctcttcgtcttcctctgcttc
atctccttccaggtcgtaatccatgtgccctccgccagatcggcggtgtcccagtggctc
ttctccggtcaccaaggtgaacaccagcgtcccaagaactgccctgggtgtggcaattcg
caggatgtgggtagtgctgacaagacgattgcgtacactgaccagtatggacggatcaag
ctgttcaaagtgaccgccagagagtttgcgtcgtcctctatctgggagaacccatggttg
cccagagatagccaaccgatagccagaacccaagaggctgctgaggatcttctactagcc
aatggatcagaagccaccaatctttcaagtgcagaaactctggaaacgaaaagcgtggat
ccgatcaaattaaagcgacaggtatttcggcgtagaagaaaggagcagagggtacaggag
ttgcttcaggtggataagaaggttgaacttgagatgcgaaatgcagcgataaacagctca
aggaactttgataataaagttaggggcagctacaacatatggaggccggagttccgcctt
actaatacagattcaaccctaaggctcatgaaagatcagataataatggccaagttatat
gccactattgcactttcccagaaggaaccagacatgtatgccttgctcatgaagtgcata
aaagaaagccaaacagccattggggatgcacttatcgatagcgaactcgattcgagtgct
ttagagagagcaaaagcaatggggcatgtgctgtcttcggctagagatgttctgtacagc
tcgagtgaagtatcaagaaaattacgtgttatgctgcagtctacggaactagatatcgat
gcagttaagaaacagaattcgttcctggttcagcatgctgcaaagactgtccccatgccc
ttgcactgcctacatatgcagctgaccaccgattattattttcgtgatggtgtgacgaag
gagcattttcatgatgctgctttgaaggaggaagaaaataaagcaaagcttgaggatagg
tcactctatcactatgctatattttctgataatgtgcttgcagcctcagtagttgtcaga
tcaactgtgacaaatgccaatgaaccagagaagcatgtgttccacattgtcactgataga
cttaattttgcagccatgaagatgtggttcatcgctcaccctccccagctggctattgtt
catgtggagaacatagacaatttcaagtggctcaattcatcgtactgttctgttttgcgg
caacttgagtcagctcggctcaaagaatattacttcaaagcacatgatccatcatcactt
tctgatggaaacgagaatctaaagtacaggaaccccaaatatttgtctatgctcaaccat
ttaaggttctacatgacagaaatacacccgatgcttgacaagatactgtttctcgatgat
gatattgttgtgcagaaggatttgacgcccctatgggatatagatcttaaagggatggta
aatggtgccattgaaacctgtaaagagagttttcatcgctttgacacttatctcaacttc
tcacacccaaagatatcagagaacttcgatccacgtgcttgtgggtgggcgttcggaatg
aacatgtttgacctgaaggagtggaggaagcgaaatatcactggaatataccattattgg
caagatttgaatgaggatcgcaagctgtggaagctgggtacattacctccgggactaatt
actttctacaacctgacatacccattgaatcgtacttggcatgttttgggccttggatat
gatccagctgttgatattgctgagatcgataatgctgcggtagttcattacaacgggaat
tacaagccctggcttgaccttgccatttccaagtacaatccgtactggtccaagtatgta
gatcttggcagctcgcatgttcagcattgctatgcgagtaaacaatga
DBGET
integrated database retrieval system
