Panicum virgatum (switchgrass): 120668959
Help
Entry
120668959 CDS
T07260
Name
(RefSeq) signal peptide peptidase-like 5
KO
K09597
signal peptide peptidase-like 2B [EC:3.4.23.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120668959
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A22: presenilin family
120668959
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_A22B
PA
Lon_C
S-Me-THD_N
Motif
Other DBs
NCBI-GeneID:
120668959
NCBI-ProteinID:
XP_039804721
LinkDB
All DBs
Position
4N:50566792..50570420
Genome browser
AA seq
536 aa
AA seq
DB search
MAAAAVLALLMVSALAGPAAGGDIVHHDDEAPKIPGCNNDFILVKVQSWVNGKEGDEFVG
VGARFGPKIVSKEKHANRTKLTLADPMECCSPPKDKVSGDILLVQRGKCKFTKKAKFAEA
AGASAIVIINHVHELYKMVCEKNETDLDIHIPAVLLPKDAGSALHTLLTSGNAVSVQLYS
PDRPVVDTAEVFLWLMAVGTVLGASYWSAWSAREAVIEQEKLLKDGHEGLLNIEAGGSSG
MVDINVVSAIMFVVVASCFLIMLYKLMSYWFVELLVVIFCIGGVEGLQTCLVALLSRWFK
PAAESFVKVPFIGAVSHLTLAVCPFCIAFAVLWAVFRQLPYAWIGQDILGITLIVTVIQI
VRVPNLKVGSVLLSCAFLYDIFWVFVSKRWFHESVMIVVARGDKTDEDGVPMLLKIPRMF
DPWGGYSIIGFGDILLPGLVVAFALRYDFVAKKSLQSGYFLWSMVAYGSGLLITYVALNL
MDGHGQPALLYIVPFTLGTLIALGWKRGELPNLWTRGEPERVCTHMHMPLLPASPN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcggcggtcctggcgctgctcatggtgtcggcgctggcggggcccgcggcc
ggcggtgacatcgtccaccacgacgacgaggcacccaagatccccggatgcaacaacgac
ttcatcctggtaaaagtgcaaagctgggtcaacggcaaggagggtgatgaatttgttgga
gttggtgctcgctttggtcccaaaattgtctccaaggagaagcacgcaaaccgaactaaa
ctcacgctggcggaccctatggagtgctgctctcctccaaaagacaaggtttctggagat
attcttttagttcaaaggggcaagtgcaaattcacaaagaaagcaaagtttgctgaagct
gctggtgcttctgccatagtaatcataaaccatgtccacgaactgtacaagatggtctgt
gaaaagaatgagacagatcttgacatacatatacctgcagttcttctaccaaaagatgca
ggttctgctttacacacacttcttacaagcggtaacgcagtttctgtgcagctgtactct
ccagaccgtcctgtagttgacactgcagaggtatttctatggcttatggctgtcggtaca
gtcctcggtgcttcatactggtctgcatggagtgctagagaagcagttattgaacaagag
aagctcctgaaggatggccatgaaggcctactgaatattgaagctggaggttctagtggc
atggtagatatcaatgtggtatcagcaataatgtttgtggtggttgcgtcatgcttctta
ataatgctctacaaactcatgtcttactggtttgtggagctactggtggtaatcttctgc
atcggcggtgtagagggtttgcaaacatgcttggttgctctgttgtccagatggttcaag
cctgctgcagaatcttttgtgaaagtaccattcattggagctgtttcacatcttactctg
gcagtttgtccattttgcattgcatttgctgttctatgggctgttttccgccaacttccg
tatgcttggattgggcaagatattcttggtatcacactgatagttacggtcatccaaatt
gtcagagtacccaacctcaaggtgggttcagttcttctcagttgtgccttcctgtatgac
atcttctgggtgttcgtctccaagaggtggtttcatgagagtgtgatgattgtggttgca
cgtggtgataagactgatgaggatggtgtgcccatgttgctaaaaattccacgaatgttt
gatccttggggtggatacagcatcattggctttggtgatatccttcttcctgggctggta
gttgctttcgccctaagatacgattttgttgcaaagaagagccttcagtctggttacttt
ttgtggtcaatggtggcctacggttccggacttctaatcacatatgttgcgctgaacctg
atggatgggcatggccaacctgcccttctgtacattgtgcccttcacactaggaacgttg
atcgcgctcgggtggaagagaggagagctgccgaacctgtggacgaggggagagcctgag
agagtgtgtacgcatatgcatatgccgctgctgcccgcgagcccaaactag
DBGET
integrated database retrieval system
