Panicum virgatum (switchgrass): 120669009
Help
Entry
120669009 CDS
T07260
Name
(RefSeq) cellulose synthase-like protein D2
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120669009
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120669009
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
zf-RING_4
zf-UDP
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
120669009
NCBI-ProteinID:
XP_039804771
LinkDB
All DBs
Position
4N:890225..895485
Genome browser
AA seq
1172 aa
AA seq
DB search
MASNGGGLRHSNSSRLSRMSYSGEDGRGAQAPAADRPMVTFARRTHSGRYVSYSRDDLDS
ELGGSPDFSPDHQEFHSYHVHIPATPDNQPMDPAISARVEEQYVSNSLFTGGFNSVTRAH
LMDKVIESEASHPQMAGAKGSSCAINGCDAKVMSDERGEDILPCECDFKICAECFGDAVK
NGGAVCPGCKEPYKNTELEDVVGGAAGTRATLSLPPPPGAGGAAASRMERRLSIMRSQKA
MTRSQTGDWDHNRWLFETKGTYGYGNAIWPKENEVESGGGAGGGLGGADGQPAEFTTKPW
RPLTRKLSIPAGVLSPYRLLILIRMAVLGLFLAWRIKHKNEDAMWLWGMSVVCELWFGFS
WLLDQLPKLCPVNRATDLAVLKDKFETPTPSNPTGRSDLPGLDIFVSTADPEKEPPLVTA
NTILSILAANYPVEKLSCYVSDDGGALLTFEAMAEAASFANMWVPFCRKHNIEPRNPESY
FNLKKDPYKNKVRPDFVKDRRRVKREYDEFKVRINGLPDSIRRRSDAYHAREEIKAMKRQ
REAALDDAVEPVKIPKATWMADGTHWPGTWIQPSAEHTRGDHAGIIQVMLKPPSDDPLYG
NPGEEGRPLDFTEVDIRLPMLVYVSREKRPGYDHNKKAGAMNALVRSSAVMSNGPFILNL
DCDHYVYNSQAFREGMCFMMDRGGDRIGYVQFPQRFEGIDPSDRYANHNTVFFDVNMRAL
DGLMGPVYVGTGCLFRRVALYGFDPPRTKEHGGCCSCCFPQRRKVKTSAAAPEETRALRM
ADFDEDEMNMSSFPKKFGNSNFLINSIPIAEFQGRPLADHPGVKNGRPPGALTVPRDLLD
ASTVAEAISVISCWYEDKTEWGHRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFR
GTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASRKMKFLQRIAYLNVGIYPFTSIFLI
VYCFLPALSLFSGQFIVKQLNVTFLTYLLVITLTLCMLAVLEIKWSGISLEEWWRNEQFW
LIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSGGDDVDDEFADLYIVKWTSLMIPPIVI
MMVNLIAIAVGFSRTIYSEIPQWSKLLGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFV
WAGLLSITISLLWVAINPPSQNSQIGGSFTFP
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaacggcggcggcctccgccacagcaacagcagccgcctctcgcgcatgtcc
tactccggcgaggacggccgcggcgcccaggcccccgccgccgaccgccccatggtcacc
ttcgcccgccgcacccactccggccgctacgtcagctactcccgcgacgacctcgacagc
gagctcggcggcagccccgacttctcgcccgaccaccaggagttccacagctaccacgtc
cacatcccggccacgcccgacaaccagcccatggaccccgccatctccgcccgtgtcgag
gagcagtacgtctctaactcgctcttcaccggcggcttcaacagcgtcacgcgcgcccac
ctcatggacaaggtcatcgagtccgaggccagccacccgcagatggccggcgccaaggga
tcctcctgcgccatcaacggatgcgacgccaaggtcatgagcgacgagcgcggcgaggac
atcctcccttgcgagtgtgacttcaagatctgcgccgagtgcttcggtgacgctgtcaag
aatggcggcgcagtctgccctggctgcaaggagccttacaagaacacggagctggaggat
gtggtcggcggggctgcggggacaagggccaccttgtcactgccacccccacctggtgcc
ggtggcgctgcagcgtccaggatggagaggcggctgtcgataatgcgatcgcagaaggca
atgaccaggagccagaccggggactgggatcacaaccgctggctcttcgagacgaaaggg
acatatgggtatggcaatgccatttggcccaaggagaatgaggtggagagtggtggtggt
gctggaggcgggctaggtggagccgatggccagcctgccgagttcaccaccaagccatgg
aggccgctcactcggaagctttccatccctgctggcgtccttagcccatacagacttctc
attctaatccgtatggccgtccttggtctgttccttgcatggagaattaagcacaaaaat
gaggacgcaatgtggctgtggggcatgtctgttgtttgtgaactctggtttggcttttca
tggctactcgatcagttgccaaagctgtgccctgtgaaccgagcaaccgaccttgctgtc
ctgaaagacaagtttgagactccaactccgtcgaaccctactggacgatcagatctacca
gggctcgatatatttgtgtccactgctgatccagagaaagaacctccattggtcacagca
aacactatcctctccatccttgctgctaattaccctgtggagaagctttcttgctatgtt
tctgatgatggaggagctctcctgacatttgaagccatggctgaagctgcaagctttgcc
aacatgtgggttcctttctgtcgcaagcacaacattgagcctcgcaatcctgagagctac
ttcaacctgaagaaggatccatacaagaacaaggtgcgtccggactttgtcaaggacaga
aggagggtgaagagggagtacgatgagttcaaggtcaggatcaatgggctgcctgattca
atccgccgtcgatctgatgcataccatgccagggaggaaatcaaggccatgaaaaggcag
cgagaggctgctcttgatgatgcagtggagcctgttaagatccctaaggccacctggatg
gctgatggcacgcattggcctggtacctggattcagccttccgctgagcatacccgtggt
gaccatgctggaataattcaggtgatgttgaaacctcctagtgatgatcccttgtatggg
aaccctggtgaagaaggcagacctcttgatttcactgaggttgacatccgtttgccaatg
ttggtctacgtgtcccgagagaagcgccctggttatgatcacaacaagaaggctggtgcg
atgaacgccctagtccgttcgtccgctgtgatgtcaaatggccccttcatcctcaacctt
gactgcgaccactatgtttacaactcccaagctttccgggaaggcatgtgcttcatgatg
gaccgtggtggtgaccgtattggttatgtccagttcccacagcggtttgagggcattgat
ccatctgatcggtatgctaaccacaacactgtcttctttgatgtcaacatgcgtgcactg
gatggtctcatgggaccagtctatgtgggcactggctgtcttttccgccgtgttgcacta
tatggatttgaccctccccgcaccaaggagcatggtggctgttgcagctgttgcttccct
cagagacgcaaggtcaaaacttcagctgctgcaccggaagaaacccgggctctgcggatg
gcagactttgatgaggatgaaatgaacatgtcatcattcccaaagaagtttggtaactcg
aacttccttatcaactctattccaattgctgaattccaagggcgtccgctagctgatcac
cctggtgtcaagaatggccgccctccgggtgctctcactgtgccccgcgaccttcttgat
gcctccacggttgctgaggccatcagtgtcatctcttgctggtacgaagacaagactgag
tggggccaccgtgttggttggatttatggttcagtcacagaggatgtggtcactgggtac
cggatgcacaatcgtggatggaaatctgtgtactgtgtcactaagcgtgatgctttccgt
ggcacagcaccaattaatctcactgaccggctccaccaggtgctccgatgggctactggt
tcagtggaaatcttcttctcccgcaacaatgctctgctcgcaagccgcaagatgaagttt
cttcagaggatcgcgtacctgaatgtcggcatctacccattcacatcaatcttcctcatt
gtgtactgcttcctgccagcgctgtccctcttctctgggcagttcatcgtgaagcaactc
aacgtgaccttcctgacatacctgctggtgatcaccctgactctgtgcatgctcgcggtg
ctggagatcaagtggtcagggatcagcctggaggagtggtggcggaacgagcagttctgg
ctgatcggaggaacgagcgcccatctggccgctgtgctgcagggccttctgaaggtgatt
gccggcatcgagatctccttcacgctgacatccaagtcaggcggtgatgatgtggacgac
gagtttgcagacctgtacatcgtcaagtggacgtcgctgatgatcccgccgatcgtgatc
atgatggtgaacctgatcgccatcgcggtggggttcagccggaccatctacagtgagatc
ccgcagtggagcaagctcctgggtggcgtgttcttcagcttctgggtgctggcccacctg
tacccgttcgccaaggggctgatggggcggaggggccggacgccgaccatcgtcttcgtc
tgggccggcctcctgtccatcaccatctcgctgctgtgggtggccatcaacccgccctcg
cagaattcccagatcggtggatcgttcacgttcccgtga
DBGET
integrated database retrieval system
