Panicum virgatum (switchgrass): 120669179
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Entry
120669179 CDS
T07260
Name
(RefSeq) far upstream element-binding protein 1-like
KO
K18738
heterogeneous nuclear rnp K-like protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120669179
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120669179
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
AP_endonuc_2
Motif
Other DBs
NCBI-GeneID:
120669179
NCBI-ProteinID:
XP_039804907
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Position
4N:complement(16592650..16603777)
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AA seq
257 aa
AA seq
DB search
MLDCLTLIYHTENATAKSEPKKGYAVLNLSENGKVCGTIEKELGKAGETTRYLQLQSGAK
IQVTGDNEAESGAPTGPAELSDTPEQISKAEQLIKEVLAEADAGSSGTGFGGQKYNAPRP
GADTFQMKFPNNNKVGFVIGKGGETIKSMQAKSGACIQVIPLHLPAGDTSTERTVHIDGT
HEQIEIAKQLGTKMQDHAGSSRCFWRQLWRVLECNDLLLMVVMPKIPYSIAALTLRSGES
LLPKRMTNTSAHTSLTK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgctagactgtcttacactgatatatcatactgaaaatgcaacagccaaaagcgaacca
aaaaagggctatgctgtgctaaatctgtcggagaacggcaaggtttgtggaacgatagag
aaagaacttggaaaagctggggaaactactaggtatctccaacttcagtcaggagccaag
attcaagtaacaggagacaatgaagctgaatcaggtgcaccgacaggaccagctgagctt
tcagacactcctgagcagataagcaaagctgagcagctgatcaaagaagttctggcagag
gctgatgctgggtcttctggtactggatttggtggccagaaatataatgcaccacggccc
ggtgccgacacgttccagatgaaatttcctaataacaacaaggtgggttttgttattggt
aagggtggtgagactataaagtccatgcaagccaaatctggagcttgtattcaggttatt
cctttgcatctgcccgctggtgatacttcaactgaaagaactgtgcatattgatggaaca
catgaacaaattgaaattgcaaagcagctcggtacaaaaatgcaggaccatgcaggcagc
agcaggtgtttttggagacagctctggagagtgcttgaatgcaatgatttgctgcttatg
gtggtgatgcccaagatcccttactctattgctgccctgaccttgagatctggagaatcg
ctcctacccaaaagaatgacaaataccagtgcacacacttcgctcacaaaataa
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