Panicum virgatum (switchgrass): 120669223
Help
Entry
120669223 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit B-3-like
KO
K08065
nuclear transcription Y subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120669223
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120669223
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
TFIID-18kDa
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
120669223
NCBI-ProteinID:
XP_039804943
LinkDB
All DBs
Position
4N:complement(20589548..20590252)
Genome browser
AA seq
234 aa
AA seq
DB search
MAPERAAVAKEAMSTEPLVPGTEPVIRGQDRLMPVANVSRIMRHALPPHAKISDGAKEMI
QDCVSEFISFVTGEANERCHTEHRKTVTAEDIVWAMNRLGFDDYIRPLNTFLQRMREIEG
GDGAGGSGSGRGSRRGSSLVALHGAQTMRPAYPDAPQGYAVRPVIPRPVPVPASNAVASR
FGSRYQLPGGQRSMAPYYGGAAFRAGGNRGGFYGDEASSSNEAPTARRARSRHY
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcaccggaacgcgccgccgttgccaaggaagcaatgtcgacggaaccgcttgtgccc
ggcactgagccggtgatccgggggcaggaccgcctgatgcccgtggccaacgtgtcccgc
atcatgcgccatgcgctgcctcctcacgccaagatctcagacggcgccaaggagatgatc
caggactgcgtgtccgagttcatcagcttcgtgaccggcgaggccaacgagcggtgccac
accgagcaccgcaagaccgtcaccgccgaggacatcgtgtgggccatgaaccgcctcggc
ttcgacgactacatcaggcccctgaacaccttcctccagcgcatgcgcgagatcgagggc
ggcgatggcgcgggcggcagcgggtccgggcgcggctcgcgccgcgggtcgtccctggtc
gcactccacggtgcgcagacaatgcgccccgcctacccagatgcaccgcaaggttacgcc
gtccgacccgtcatccctcgcccggttccagttccagccagcaacgccgtggcgtcgcgc
ttcggcagccggtaccagctgcccggtggccagcgttccatggctccctactacggcggg
gcggcgttccgagctggggggaatcgtgggggattctacggcgacgaggcaagctcgtcg
aacgaggcaccaacggcgcggcgtgctagatcgcgccactactag
DBGET
integrated database retrieval system
