KEGG   Panicum virgatum (switchgrass): 120669242
Entry
120669242         CDS       T07260                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RHA2A-like
  KO
K16282  E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120669242
Enzymes [BR:pvir01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     120669242
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120669242
SSDB
Motif
Pfam: zf-RING_2 zf-rbx1 zf-RING_11 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_16 zf-RING_5 zf-RING_UBOX zf-RING_Vps41 zf-RING-like zf-C3HC4_3 RINGv SLX1_C zf-HC5HC2H_2 zf_RING_Vps8_fungal zf-RING_4 zf-C3HC4_4 PHD PHD_NSD FANCL_C zf-C3HC4_5 zf-HC5HC2H
Other DBs
NCBI-GeneID: 120669242
NCBI-ProteinID: XP_039804957
LinkDB
Position
4N:23349459..23349932
AA seq 157 aa
MGLSSGLHDVSGAAPLPLLLLASLASALAGLFSVVSSPGAGAGAKPNTTSSSVRISGLDA
LVALADCLAASYVSTADGATAAAAGDCTVCLSAIAEGERVRVRTLACRHAFHAACLDRWF
DQSSLSCPLCRAGPAARDDDARRLSAGEDAVSWFARF
NT seq 474 nt   +upstreamnt  +downstreamnt
atgggcctctccagcggcctccacgacgtctccggcgcggcgcccctgccgctgctcctc
ctggcgtccctcgcctccgcgctcgcaggcctcttctccgtcgtcagctcccctggcgcc
ggcgccggtgccaagccgaacaccacctcctcctccgtccgtatttccggcctcgacgcg
ctcgtcgcgctcgcggactgtctcgcggcatcctacgtctctaccgcggatggggccacc
gcggcagctgctggcgactgcacggtgtgcctgtcggccatcgcggagggcgagcgcgtg
cgcgtgcgcacgctcgcctgccggcacgccttccacgcggcctgcctggaccgctggttc
gaccagagcagcctctcgtgcccgctctgccgcgccgggccagccgcgcgagatgacgat
gctcggcggctcagcgccggcgaggacgccgtctcgtggttcgcccgtttctga

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