Panicum virgatum (switchgrass): 120669260
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Entry
120669260 CDS
T07260
Name
(RefSeq) putative cellulose synthase-like protein D5
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120669260
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120669260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
Glyco_trans_2_3
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
120669260
NCBI-ProteinID:
XP_039804974
LinkDB
All DBs
Position
4N:complement(27309598..27312852)
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AA seq
1002 aa
AA seq
DB search
MSGVTSGDYANYTVLMPPTPDNQPYSGGGGAPSSTSTGGGSRPDDFPLPPYGPSASPKIV
NRRGGAGGDDVAGGVSSKMDRRLSTARVPAPSKSLLVRSQTGDFDHNRWLFETKGTYGIG
NAYWPQDNSAYAAADGGGGAGGGPVKMEDLVDKPWKPLSRKVAIPPGILSPYRLLVLVRF
ISLFLFLIWRATNPNLDALWLWGISIVCEFWFAFSWLLDQMPKLNPINRAVDLTALREKF
ESVTPANPTGRSDLPGLDVFISTADPYKEPPLTTANSLLSILGTEYPVEKLFVYISDDGG
ALLTFEAMAEACEFAKVWVPFCRKHSIEPRNPDSYFNQKGDPTKGKKRPDFVKDRRWIKR
EYDEFKVRINGLADLIRRRANAMNARERKLARDKQQAAADVPAVKATWMADGTHWPGTWL
DPAPDHAKGDHASIVQVMIKNPHYDVVPGDASSHPYLDFTGVDVRVPMFVYLSREKRPGY
DHNKKAGAMNAMVRASAILSNGPFMLNFDCDHYIYNCTAIREAMCYMLDRGGDRICYIQF
PQRFEGIDPSDRYANHNTVFFDGNMRALDGLQGPMYVGTGCLFRRYAVYGFNPPRTNEYR
GIYGQVKVPVADPHGHPEEHPDHEAPQRFGKSKMFIETIAVAEYQGRPLQDHPSVQNGRP
PGALLMPRPPLDAATVAESVAVISCWYEDGTEWGLRVGWIYGSVTEDVVTGYRMHNRGWR
SVYCITRRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNALLASRRLKFLQRLSYLN
VGIYPFTSLFLIMYCLLPALSLFSGQFIVATLDPTFLCYLLLITITLMLLCLLEVKWSGI
GLEEWWRNEQFWVIGGTSAHLAAVLQGLLKVIAGIEISFTLTAKAAAEDDDDPFAELYLV
KWTSLFIPPLAVIGINIIALVVGVSRAVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLM
GRRGRTPTLVYVWAGLISITVSLLWITISPPDDRITQGGIDV
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtgttactagcggcgactatgccaactacaccgtcctcatgccgcccaccccg
gacaatcagccgtacagcggcggcggtggcgcgccgtcctccacgtcgacgggtggtggc
tccaggccagacgacttccccttgcctccctatggcccgtcggcgtcccctaagatcgtc
aaccggcgcgggggcgccggcggggacgacgtcgccgggggcgtcagcagcaagatggac
cggcggctgtcgacggcgcgcgtgccggcgccgtccaagtcgctgctggtgcggagccag
accggggacttcgaccacaaccggtggctgttcgagaccaagggcacgtacggcattggc
aacgcgtactggccgcaggacaacagcgcgtacgccgccgccgacggcggcggcggcgcg
ggcggcggccccgtcaagatggaggacctcgtggacaagccgtggaagccgctcagccgg
aaggtggccattccgcccggcattctcagcccctacaggttgctggtgctggtgcgcttc
atctcgctgttcctgttcctgatctggcgcgcgacgaaccccaacctggacgcgctgtgg
ctgtgggggatctccatcgtgtgcgagttctggttcgccttctcgtggctgctggaccag
atgcccaagctgaacccgatcaaccgggccgtcgacctcaccgcgctccgggagaagttc
gagtccgtgacgccggccaacccgacgggccgctccgacctccccgggctcgacgtcttc
atctccaccgccgacccctacaaggagccgcccctgacgactgccaactcgctgctctcc
atcctcggcaccgagtaccccgtggagaagctcttcgtctacatctccgacgacggcggc
gcgctgctgaccttcgaggccatggcggaggcgtgcgagttcgccaaggtgtgggtgccc
ttctgccgcaagcactccatcgagccgcgcaacccggactcgtacttcaaccagaaggga
gaccccaccaagggcaagaagcggccggacttcgtcaaggaccggcggtggatcaagcgc
gagtacgacgagttcaaggtccgcatcaacgggctggcggacctcatccgccggcgcgcc
aacgccatgaacgcccgcgagcgcaagctcgcccgcgacaagcagcaggccgccgccgac
gtcccggccgtcaaggcgacctggatggccgacggcacccactggcccggcacctggctg
gacccggcccccgaccacgccaagggcgaccacgcgagcatagtgcaggtgatgatcaag
aaccctcactacgacgtggtccccggcgacgcctcgtcgcacccgtacctggacttcacc
ggcgtggacgtgcgcgtgcccatgttcgtgtacctctcgcgcgagaagcgccccgggtac
gaccacaacaagaaggccggcgccatgaacgccatggtgcgcgcgtcggccatcctctcc
aacgggcccttcatgctcaacttcgactgcgaccactacatctacaactgcacggccatc
cgcgaggccatgtgctacatgctcgaccgcggcggcgaccgcatctgctacatccagttc
ccgcagcgcttcgagggcatcgacccctccgaccgctacgccaaccacaacaccgtcttc
ttcgacggcaacatgcgcgcgctcgacggcctgcagggccccatgtacgtcggcaccggc
tgcctcttccgccgctacgccgtctacggcttcaacccgccgcgcaccaacgagtaccgc
ggcatctacggccaggtcaaggtgcccgtcgccgacccgcacggccaccccgaggagcac
ccggaccacgaggcgccgcagcgcttcggcaagtccaagatgttcatcgagaccatcgcc
gtggccgagtaccagggccgcccgctgcaggaccacccgtcggtgcagaacggccggccc
cccggcgcgctgctcatgccgcgcccgccgctggacgcggccaccgtggcggagtccgtg
gcggtcatctcctgctggtacgaggacggcaccgagtgggggctgcgcgtcggctggatc
tacggctccgtcaccgaggacgtggtcaccggctaccgcatgcacaaccgcggctggcgc
tccgtctactgcatcacccgccgcgacgccttccggggcacggcgcccatcaacctcacc
gaccgcctccaccaggtgctgcgctgggcgacgggctccgtggagatcttcttctccaag
aacaacgcgctcctggcctcccggcggctcaagttcctgcagcgcctctcctacctcaac
gtcggcatctaccccttcacctccctcttcctcatcatgtactgcctcctgccggcgctg
tccctcttctcggggcagttcatcgtggccacgctcgacccgaccttcctctgctacctc
ctgctcatcaccatcacgctcatgctgctctgcctgctggaggtcaagtggtccgggatc
ggcctcgaggagtggtggcgcaacgagcagttctgggtcatcggcggcacgtcggcgcac
ctggcggccgtgctgcagggcctgctcaaggtcatagcgggcatcgagatctccttcacg
ctcaccgccaaggcggcggccgaggacgacgacgaccccttcgccgagctctacctcgtc
aagtggacgtcgctcttcatcccgccgctcgccgtcatcgggatcaacatcatcgcgctc
gtcgtcggcgtgtcgcgcgccgtgtacgccgagatcccgcagtacagcaagctgctgggc
gggggcttcttcagcttctgggtgctggcgcactactacccattcgccaaggggctcatg
gggcggcgcggccgcacgcccaccctcgtctacgtctgggcggggctcatctccatcacc
gtctccctgctctggatcaccatcagcccaccggacgacaggatcacacagggcggcatc
gatgtgtga
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