Panicum virgatum (switchgrass): 120669527
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Entry
120669527 CDS
T07260
Name
(RefSeq) myosin-8-like isoform X1
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120669527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120669527
04131 Membrane trafficking [BR:
pvir04131
]
120669527
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120669527
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120669527
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120669527
mRNA cycle factors
P-body specific factors
120669527
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120669527
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120669527
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120669527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
Hpr_kinase_C
ZapB
AAA_22
AAA_16
DUF1664
Motif
Other DBs
NCBI-GeneID:
120669527
NCBI-ProteinID:
XP_039805214
LinkDB
All DBs
Position
2K:complement(17162746..17185571)
Genome browser
AA seq
1507 aa
AA seq
DB search
MASKVRFTVGSQVWVEDADVAWIDGLVEEVQGDELIINCSSGKKVTANVSSVYPKDAEAK
RCGVEDMTRLAYLNEPGVLQNLKSRYAMNEIYTYTGNILIAVNPFQRLPHLYNNHMMGIY
KGAEFGDLSPHPFAIADRAYRLMINYGKSQAILVSGESGAGKTESTKSLMQYLAFMGGKA
QSGGRSVQQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQNGKISGAAIRTYLLE
RSRVCQISDPERNYHCFYMLCAAPPEDRERYKLGDAASFHYLNQSSCIKLNAMDDASEYI
TTRRAMDIVGINSDEQDAIFRVVAAILHLGNVEFTEGSEADSSVPKDEKSQFHLKTAAEL
FMCDEKGLEESLCKRVMATRGESIVKNLDARAAALSRDALARIVYSRLFDWLVNKINTSI
GQDLSSKLLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEID
WSYIQFVDNQEILDLIEKKPGGIIALLDETCMLRNSTHEIFAEKLYQKFKGNPHFSRPKF
ARSDFTIHHYAGNVTYQTDLFLDKNIDYAVNEHQVLLNASRCSFVSSLFPPSEESTKSTK
FTSIGSSFKQQLQALLETLSATEPHYIRCIKPNNALKPAIFENSSVLQQLRCGGVLEAIR
ISCLGYPTRRRFDEFVDRFGVLLPEVLGESYDEVTATNMLLEKANMTGYQIGKTKVFLRA
GQMAELDALRTEVLGRSATKIQRKVRSYLARKNFIQLRISATHLQAICRGQIARHHYEDL
RREAASLTIQAYYRMHFARKNYRNLCSASTTIQSGLRGMAARNELHFRRQTKAVVIIQSF
WRSYVARSRYTSLKKAAVTTQCAWRGRVARKELRKLKMAAKETGALQAAKNKLEKQVEEL
TWRLQLEKRIRTDMEEAKTQENRKLQQQLQELQLQSKETKDLLKREQEVAKEALEKAALV
PEVKVDTTLIDKLTAENENLKALVGSLETKIDETEQKFEEMKKTREEWMKKAADAESKIN
ELTNTMLSFQEKVTTMEAENQLLRQQALLRTPVRTIPENSSPKYNLTNGSPRSEQMTPHG
TPPAPKEYGSFAQPRASFFERQHESVDALINCVSENIGFSEGKPVAAVTIYKCLVHWKIF
ETEKTSVFDCLIQIFGSAMQKHDSNEDLAYWLSNSSTLLIMLQKSLKAAGTTGSSPLKRP
QTQSSFLGRMVFRSSNITVDMDLVRQIEAKYPAFLFKQQLSAFVEGLYGMICDNLKKDLS
SLLSYAIQVPRTVKASMVRGRSFGSSSLPRGRSFSNQASYWQAMVDNLNELLKILQDNCV
PSIFIRKIFTQVFSFINAQLFNSLLVRHECCSFSNGEYVKQGLAQLEAWCGEVKPEYAGS
ALDELRHIRQAVGFLVIFKKFRISYDEIVNDLCPVLSVQQLYKICTQYWDDKYNTESVSE
EVLEEMRTLITKESNLDNLENTFLLDDEISMPISLEEIADSMDAKEFQNVTPPQELTSMP
AFQFLKS
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaagtccgttttacagtgggttctcaagtttgggttgaggacgcggatgtg
gcttggattgatgggctggtggaggaggtccagggagatgaattaataataaactgcagt
tctgggaagaaggttactgccaatgtctcaagtgtgtatcctaaggatgcagaagcaaag
cgctgtggtgttgaggatatgacaaggctggcttatctgaatgaaccaggggttctacaa
aacttgaagtctagatatgcaatgaatgaaatatatacttatactggtaacatattaata
gctgtcaacccatttcaaagacttccacacctttacaacaatcacatgatgggaatttat
aaaggagcagaattcggcgacctgagtccacatccttttgccatcgcggaccgtgcatat
aggcttatgattaattatggtaaaagccaagccatattagtgagtggcgaaagtggagct
ggtaagacagaaagcactaaaagtcttatgcagtatcttgcatttatgggtggcaaggct
caatctggaggaaggtcagtgcaacaacaagtactggagtccaatcctgttcttgaggca
tttggaaatgcaaaaacagtcaggaataacaattcgagtcgtttcggcaaatttgttgaa
atccagtttgaccagaatgggaagatttcaggagctgccataaggacttacctccttgaa
agatctcgtgtctgtcaaatatctgatccagaaaggaactatcactgcttttacatgctt
tgtgctgcaccacctgaggaccgtgagagatataaattaggagatgctgcgtcatttcac
tatcttaatcaatccagttgcattaaacttaatgcgatggatgatgcctcagaatatatc
acaactaggagggcgatggatattgtgggcattaattctgatgaacaggatgcgatattt
agagttgtagctgctattctccatttgggcaatgtggaatttacagaagggagtgaagca
gattcttctgtacccaaagatgaaaaatcccagttccatcttaagacagctgcagagctt
ttcatgtgtgatgaaaagggtcttgaagaatctttgtgtaagcgtgttatggcaacacgt
ggtgaaagtattgtgaaaaatttagatgcacgagcagcagctcttagtagagatgcattg
gccagaattgtttactctcgtttgtttgattggcttgtaaataagatcaatacttcaata
ggacaagatctgagctcaaagcttctgattggtgtgctggatatatatggttttgagagt
ttcaagacaaacagtttcgagcagttctgtatcaacttaactaatgagaagctgcagcaa
cactttaatcagcatgtgtttaagatggaacaagaagaatatacaaaggaagaaattgat
tggagttatatccagtttgtggataaccaagagattcttgatcttattgagaagaaacca
gggggtataattgctctactggatgagacttgcatgttgcgaaattcaacccatgaaata
tttgctgaaaagctttatcaaaaatttaaagggaacccacacttcagtaggccaaaattc
gcgcggtctgatttcactattcatcactacgctggaaatgttacatatcaaacagatctg
ttcttggataagaacattgattatgctgtgaatgagcatcaagttttactaaatgcttct
agatgttcatttgtttcaagtcttttcccaccttctgaagaatcaactaaatccacgaaa
tttacatcaataggttcgagctttaagcaacaattacaagctttgctggaaacactgagt
gcaacagaaccacattatatacgctgcataaagcccaataatgctctcaagccagcaatt
ttcgagaacagtagtgttcttcagcaactacgatgtgggggtgtattagaggcgataaga
ataagctgtctaggatatccaacgaggcgtagatttgatgaatttgttgatcgttttggt
gtcttactacctgaagtacttggtgaaagttatgatgaagttactgctacaaacatgctc
cttgagaaagccaatatgacaggctatcagatagggaaaactaaagtgtttctgcgggct
ggtcaaatggctgagttagatgctctgagaactgaggtgttgggccgctctgctaccaaa
atccagagaaaagttcggtcttacctggctcgcaaaaatttcattcaacttcgaatatct
gctacccatcttcaggctatttgcagaggacaaattgcaagacatcattatgaagatctc
cgcagggaggctgcttcattaacaatacaagcctactatcgcatgcactttgcaaggaag
aactacagaaatctctgttccgcatcaactactatccaatctggtctacgtggtatggct
gctcgcaacgaactccatttccgtcggcaaacaaaagctgtggtgattattcagagtttc
tggcgtagttatgtagcacgctctcggtacacgagcttgaagaaggcagctgttactaca
caatgtgcttggagaggaagagttgccagaaaagaactccggaaacttaaaatggctgct
aaagaaactggtgctctccaagctgccaagaataaattagagaagcaagtggaggagctc
acctggcgtctgcaactagagaaacgcatcaggactgacatggaagaagctaagacacaa
gaaaataggaagttgcaacaacaattgcaggaactacaattacaatccaaggagacaaaa
gatctgttgaaaagggaacaagaagttgcaaaagaagcactggagaaagctgccttagta
ccagaggtcaaagttgatacaactcttattgataaactcactgctgaaaatgagaatcta
aaggctttagtgggctctcttgagaccaaaattgatgaaacagaacagaagtttgaagaa
atgaagaaaactagggaagagtggatgaagaaagctgcagatgccgagtcaaagataaat
gaactaaccaacacaatgctaagttttcaagaaaaggtaaccactatggaagcagaaaat
caattacttcgccagcaggcactgttgcgtactcctgttagaacaatacccgagaattca
tctccaaaatataatttgactaatggcagtccacgtagtgaacaaatgacacctcatggc
acccctccagctcccaaggaatatgggagctttgcacaacctagggcatccttttttgaa
aggcagcatgagagtgttgatgcccttataaactgtgttagtgaaaatattggctttagt
gaaggaaagccagttgctgcagtaaccatatataagtgtcttgtgcattggaagatcttt
gaaacagaaaaaacaagtgtttttgattgtcttattcaaatttttggttctgcaatgcag
aaacacgatagcaatgaggatcttgcatactggttatcgaattcatcgactttattgatc
atgcttcaaaagagcctaaaagcagctggcacaacaggaagtagtccactgaagagacca
cagactcaatcatcatttcttgggaggatggtattccgctcttcaaacatcactgttgat
atggaccttgtgcgccaaatcgaggccaagtaccctgcttttctttttaagcagcaactt
tcagcatttgtcgaaggcttatatggaatgatctgtgacaatttgaagaaagatctttct
tcgttgctatcatatgctattcaggtcccaagaactgttaaagctagtatggtgagaggg
cgttcttttggatcatcaagtttgccaaggggacgttcattttcaaatcaagctagttat
tggcaggcaatggtcgataatttgaatgaactcttgaaaattttgcaagacaattgtgtc
ccatctatttttatccggaagatatttacccaggttttctcatttatcaatgcacaactt
ttcaatagccttcttgtacgtcatgagtgctgctctttcagtaatggagagtatgtgaaa
caaggattggcacaactagaggcatggtgtggagaagtcaagccagagtatgcaggatct
gcattggatgaactcaggcatatcaggcaagctgttggtttcttggtcatattcaaaaag
ttcaggatttcatatgatgagatagtcaatgatctctgcccagtactaagtgtacagcag
ctctacaaaatatgcactcagtactgggatgacaaatataacacagagagcgtgtcagaa
gaggtccttgaggagatgcgaacactgataaccaaggaatcgaacctggacaatctggag
aacacctttttactggatgacgaaattagcatgcccatatcacttgaagagatagcagat
tctatggatgccaaagaatttcagaatgtcaccccgccacaagaacttacttcaatgcct
gccttccaattcttgaagagctga
DBGET
integrated database retrieval system
