Panicum virgatum (switchgrass): 120669545
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Entry
120669545 CDS
T07260
Name
(RefSeq) ubiquitin-like-specific protease 1D
KO
K16287
ubiquitin-like-specific protease 1C/D [EC:
3.4.22.68
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120669545
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.68 Ulp1 peptidase
120669545
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
120669545
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C48
BrnA_antitoxin
RickCE_cat
Motif
Other DBs
NCBI-GeneID:
120669545
NCBI-ProteinID:
XP_039805251
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All DBs
Position
4N:complement(14719269..14741871)
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AA seq
575 aa
AA seq
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MAMAAASQEELPLEAGAADDAMREREGVDPEVRQLPDHVLREKAQRLQIMLDSEMADRLR
DRGKKLRLSLDAILRELNRRQAPRGGARAPGGDGCERIVLSNCAESSDTRKASHRHRMDQ
VGRKPGSGLHSDPNRAKLSDFQFSFGVDEKAAVDISSLEITTRSLNEPNTSVENEGKLCK
EEDSCKPSSEPTDLFHEELHVDTSYNTEKISSDDASNNNDHNRICEAAPTPSRKRKGADP
ANFSMRLRSRKEEVVLLDGDTPHPDSAEGTSNNRDAKKLYYPSREHPNSVEISSDDIRCL
QPESLLTSPIMNFYIMYLQGPLSPISRPRGEYHIFNTYFFSKLEAMTSKEDKTTYFLKLR
RWWKGVDIFEKAYMLLPVHAETHWSLVIICMPTKEDQAGPIILHLDSLKFHSSRLIFSVV
SRFLKEEWNYLKENVSSSESPLRETVWKNFPRKIEKKTIEVPQQENDYDCGLFVLYYMQR
FIQEAPKRLQKKDLSMFGKRWFRPEEPSQLRDEIRHLLQKCREADPKSFATELFGEAEPK
NDVTVPTTSEHLQETVDAAKAKDHALIEIEETCSL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggccgcggcctcacaggaggagctccccctggaggcaggggccgctgacgat
gcgatgcgggagagggagggggtcgaccccgaagtgcggcagttaccggaccatgtgctg
cgggagaaggcccagcgcttgcagattatgcttgacagcgaaatggccgaccgcctccgg
gaccgcggcaagaagttgcgcttgtcgctcgatgccatactccgggagctcaatcgccgc
caggccccccgcggcggggcacgagcgccgggtggtgatggatgtgaaaggatagtccta
tcaaactgtgctgaatcatctgatacaaggaaggcaagtcatcgccaccgtatggatcaa
gtagggagaaagcctggatctggtttgcatagtgacccaaatagagctaaactatctgat
ttccagttttcattcggggtggatgaaaaggcagctgtcgacatatctagtttggaaata
acaactaggagcctgaatgagcctaacacttcagtagagaatgagggaaagttgtgcaaa
gaggaagattcttgtaaaccctcgtcagagcctacagatttatttcatgaagagttgcat
gtggacacctcatacaatacggagaagatatcttctgatgatgcatcgaataacaatgac
cacaataggatatgtgaagcggctcctacaccctctcgtaaaaggaagggagctgatcca
gctaatttttcaatgcgattgagatcaagaaaagaagaggtggtcctcctggatggagac
acaccccatccagattctgctgaaggaacatccaataacagggatgcaaagaagctatac
tatccttcaagggaacacccgaattctgttgagatatcttctgatgacatcagatgtctc
caacctgaatcattgctgacctcacctataatgaacttctacattatgtatctacaggga
ccattgtcaccgattagtagaccaagaggcgagtatcacattttcaacacgtacttcttt
agcaagcttgaagccatgacatcaaaggaggacaagaccacttattttttgaagttgaga
agatggtggaagggtgtagatatatttgaaaaggcatatatgttgttgcctgtgcatgca
gaaacacattggagtctcgtaattatatgcatgccaacaaaagaagatcaagcaggtccc
atcatccttcatttggattctctgaagtttcatagtagcagattgattttcagtgttgtt
agcagattccttaaggaagaatggaactacctgaaggagaatgtttcatcctcagaaagt
cccttacgagaaacagtgtggaagaactttcctcgtaaaattgaaaagaaaacaattgag
gtgccacagcaggaaaacgactatgattgtggcctgtttgtgctgtactatatgcagcgg
tttattcaggaggcgcctaaaaggcttcagaagaaagatctttcaatgtttggcaaacgg
tggtttcggcctgaagagccatctcagcttagagatgaaatccgccatttactccagaag
tgcagggaagccgatcctaagagctttgcaactgagttgtttggggaagctgaacccaag
aatgatgtgaccgtgccaacaacatcagagcacctgcaagagacagttgatgctgccaaa
gcaaaagaccatgctttgattgaaattgaagaaacctgcagtttgtga
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