Panicum virgatum (switchgrass): 120669559
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Entry
120669559 CDS
T07260
Name
(RefSeq) probable histone acetyltransferase HAC-like 3
KO
K04498
E1A/CREB-binding protein [EC:
2.3.1.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03083
Polycomb repressive complex
pvir03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120669559
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120669559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120669559
03036 Chromosome and associated proteins [BR:
pvir03036
]
120669559
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120669559
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
120669559
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Other transcription factors
Pocket domain CBP
120669559
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
120669559
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
120669559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_KAT11
zf-TAZ
PHD
Motif
Other DBs
NCBI-GeneID:
120669559
NCBI-ProteinID:
XP_039805268
LinkDB
All DBs
Position
4N:15103104..15111147
Genome browser
AA seq
1267 aa
AA seq
DB search
MMTQTMQGKVMPSYAPSSFSIRQQMSPGDFEMLQPDNMDQSTSPIRGIIIQKIASCLKMR
EQFAKCSPDYLLKISRNIDELLFKSAPKVHYMDLSTLEVRVNYLLSSVSYRSHKDPWISS
AASPPTNLHQLPGMQMTDSSVYHNRFDPAFTNLPARARDMHTHSMFASQRYVAYNHNVSA
ANFATERPESFRSTIVAPCVSALPNCSSGLGGIASAGLPNDHVKNHFPGDAHPVESPISF
MSGSSSPLSAVCDPTTSSSPLIRSSMDSISKASGQKLSAGSDSTSEGQSLQQYREYEKKL
DGAWSQPVEHSIHSDSTTERHEMYPKGQFQLDRCVQMKEKYWCMSDCEDLCREKYSSLST
PNAQYQCCFITGCDPSDPEREQIERSEQTSTSTVSKPTSPVSDESYGKRPAKRLKADVPN
LVDVNQVESPKEQKPLVNESHACGQTVQQEITESPTKLPCSSLGDINADTDNMLEQGSED
VHNMEIATEELPCVKGDIEMTAALDKTASGIDLSLRRKRGASILYTLTAEELRDHISSLI
NQHTCLGKVTYQEIQNNEVLPDPNKCSLCGMEKLLFEPPPRFCALCSKIINSTGCYYAEV
ENGKDKTSICSKCHHLSSSRAKYVKKSDYAETDAEAEWWVQCDKCKAWQHEICGLFNRKC
EGAKGEYTCAKCFLKEKDSGDIHALEASSVLGARELQRTKLSDHIEQRLSERLEQDRQQR
ASALGKAAEEVPRVEGLTVRVVSSTDRILQVQPRFHEFFKQEKYPGEFPYKSKAILLFQK
IEGVDVCLFAMYVQEYGSDCPSPNQRHVYLAYIDSVKYFRPEIKSTSGEALRTFVYHEIL
IGYLDYCKKRGFVSCSIWACPSTKRDDYVLYCHPTVQKMPKSDKLRSWYQNLIKKAVKEG
VVVERSTLSDFFLQPTNECKANISAACLPYCENDFWPGEVERLLEKKDDKTSQKQETQVG
RLLRVAKRDDRKGNLEDILLLHKLGERLRSMKEDFMMLCLQQFCKHCHKPIISGRSWVCT
SCKNFHLCDKCHAEEQNTAQKDRHPATTKQKHAFQRIEVEPLPETEDGDPTMESKYFDSR
IDFLKHCQDNQFQFDTLRRAKHSTMMILYYLHNSTCSACHHAVDQCLVWRCLECLGCTFC
DTCYKQNGESLHIHELRKIDTGKKNTMQDYIECLVHASRCFDPRSCTLQVCLTLKKLFFH
GVRCEIRARNQAGCNKCVKMWKLLLHHSKGCDETDCMVPRCRDIKEYMVEKMKVAESCVV
AGQQLLV
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgatgactcaaaccatgcaagggaaagttatgccctcctatgcgccgagcagcttttct
atccggcaacagatgtcaccgggcgattttgaaatgcttcagccggataacatggatcaa
tctacctctccgattcgtggcattatcattcagaaaattgcaagttgcctgaaaatgagg
gaacaatttgctaagtgcagcccagattaccttctgaaaatctcgagaaacattgacgaa
ttacttttcaaaagtgctccaaaggtacattacatggatctcagcactctagaagtccgt
gtgaattatttgctcagttctgtatcatatagaagccacaaagatccttggatatcttca
gcagcttcaccgcccacaaatttacatcagctgcctgggatgcagatgacagactctagt
gtctatcataatagatttgaccctgcttttactaatttgcctgcacgtgcaagagacatg
catacacattctatgttcgcttctcagagatatgtagcatataatcacaatgtgtcagct
gctaattttgctactgaaaggcccgaaagctttaggagcaccatagttgctccatgtgtt
tcagcacttcctaattgtagttctggccttggtgggattgctagtgctggattgccaaat
gaccatgtcaagaaccattttccaggggatgctcatcctgttgagagtccaatatcattt
atgtctgggagttccagtcctttatcagccgtgtgtgatccaaccacaagttccagtcca
ttgataagatcatcgatggactctatctctaaagccagtggacaaaaactttctgctggt
tctgattccaccagtgagggacaatcattgcaacagtacagagaatacgagaaaaagcta
gatggtgcatggagccagccagtagagcactcaattcactcagatagcacaactgaaaga
catgaaatgtatcccaagggacaatttcaacttgacagatgtgtgcaaatgaaagaaaaa
tattggtgcatgtcggactgtgaagatttgtgcagggagaaatactcaagtttaagcacc
cccaatgcccagtaccagtgctgcttcataacaggttgtgatccttctgaccctgagaga
gagcaaattgagagatctgagcagacatcaactagcacagtatcaaagccaacttcacct
gtttcagatgaatcttatggtaagcgtccagcaaaacgcctgaaggctgatgttcccaat
cttgttgatgtgaatcaagtagagagtccaaaggagcaaaagcctcttgtgaatgagagt
catgcatgtggtcaaacagtacaacaagaaatcacagaatcacctacaaaattaccttgc
agttccttgggtgacattaatgctgacaccgataatatgctagaacagggtagtgaagat
gtacataacatggagattgctacagaagaattgccctgtgtaaagggtgacattgagatg
acggctgcattggataagacagcaagtgggatcgatttaagtttgaggagaaaaagagga
gcttctatactttacacgttaactgctgaggagcttagagatcacattagtagtctaata
aatcagcatacttgtctgggcaaggtgacatatcaagaaatccaaaacaatgaagtcttg
cctgatccgaataaatgcagtttgtgtgggatggagaagcttctttttgaaccacctcca
cgattttgtgctctctgttccaaaataataaattctacaggctgctattatgctgaagtt
gaaaatggaaaggataaaacttctatttgtagcaaatgccaccatctaagcagttccaga
gctaaatatgttaagaaatccgattatgctgaaacagatgctgaagctgagtggtgggtc
cagtgcgacaagtgcaaagcttggcagcatgaaatctgtggtcttttcaacagaaaatgt
gaaggggcgaagggtgaatatacttgtgcaaaatgttttttgaaggaaaaggacagtgga
gacattcatgcactagaggcatccagtgttcttggagcacgggagttacaaagaactaaa
ttaagtgatcatattgagcaaaggctttctgaaaggcttgagcaggacaggcaacagagg
gcaagcgccttaggaaaggctgctgaagaggtaccacgagttgaaggtcttacagttaga
gtagtatcttcaactgacagaatactgcaagtccaaccacgttttcatgaattttttaaa
caagaaaagtatcctggggaatttccatacaaatcaaaggcaattctcttgtttcaaaag
attgaaggtgtggatgtttgcctgttcgccatgtacgtacaagagtacggttcagattgc
ccatcaccaaatcaaaggcatgtttatcttgcatatatcgactctgtcaagtacttcagg
cctgaaatcaaatctacaagtggggaggctctccgtacctttgtgtatcatgaaattttg
atcggttatctggattactgcaagaaacgagggtttgtgagttgttccatatgggcttgc
ccatctacaaagcgtgatgattatgttttatattgtcatccaacagtacaaaagatgccc
aagtcggacaagcttcgaagctggtatcagaacttgatcaagaaagctgtcaaggagggt
gttgtcgtggagcgtagtacgctctctgactttttccttcagcctaccaatgaatgcaag
gccaatatatccgcagcatgcctgccatactgtgagaatgatttctggcctggagaagtg
gagaggcttcttgagaagaaagatgataaaacctcacagaagcaagagacacaagtagga
aggctcttacgtgttgccaaacgtgatgacagaaaaggaaaccttgaggatattttactt
ctgcacaagcttggtgaaaggttgcgctccatgaaagaagacttcatgatgctttgtctg
cagcagttttgcaagcactgtcacaaacctattatatctggtagaagttgggtttgcact
agctgtaaaaatttccatctttgtgacaagtgtcatgcggaggagcagaatacggcacag
aaggacaggcatccagcgacaacgaaacagaagcatgcatttcaaagaatagaggtagaa
cctcttccagagactgaggatggagatccaacaatggaaagcaaatattttgacagcaga
atagatttcttgaagcactgtcaagacaatcaattccaatttgataccctccgtcgggca
aagcattcgacaatgatgattctttattatctacataattcaacttgttctgcttgccac
catgctgtggatcaatgcttggtgtggcggtgcctagagtgcctaggctgcacgttttgt
gatacatgctacaaacaaaatggtgaaagtttgcatattcatgaattaagaaagattgac
actggcaagaagaatactatgcaggactacattgaatgccttgtgcatgcatcgagatgc
ttcgatcctcgtagctgcactcttcaagtttgtttaaccttgaagaaactgttcttccac
ggtgtacgatgtgagatccgtgcccgcaatcaggcaggttgcaacaagtgtgttaaaatg
tggaaacttctgctccaccactcaaaaggttgcgatgaaacagactgtatggttcccaga
tgcagggatataaaggaatacatggttgaaaagatgaaggtagctgagtcctgtgttgta
gcaggccagcagcttcttgtataa
DBGET
integrated database retrieval system
