Panicum virgatum (switchgrass): 120669581
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Entry
120669581 CDS
T07260
Name
(RefSeq) soluble starch synthase 1, chloroplastic/amyloplastic-like
KO
K00703
starch synthase [EC:
2.4.1.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120669581
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120669581
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.21 starch synthase (glycosyl-transferring)
120669581
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Storage polysaccharide
120669581
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_5
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Motif
Other DBs
NCBI-GeneID:
120669581
NCBI-ProteinID:
XP_039805305
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Position
4N:complement(4484931..4492725)
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AA seq
656 aa
AA seq
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MATPAVSAACLLLARAAGAPGTRRGGGDQARPRRLQRAVRRRCVAELSREGPAPRPMPQL
APPLVPGFLAPPRDEPAPAREPASTPPPVSDDGLGDLDLGLELEEIAENSINNTVVVASE
QDSKIMVGKEQESEIMVGKEQARAKVTHSIVFVTGEASPYAKSGGLGDVCGSLPVALAAR
GHRVMVVMPRYLNGTSDKNYSNAFYTEKHIRIPCFGGDHEVTFFHEYRDSVDWVFVDHPS
YHRPGNLYGDKFGAYGDNQFRYTLLCYAACEAPLVLELGGYIYGQNCMFVVNDWHASLVP
VLLAAKYRPFGVYKDSRSILVIHNLAHQGVEPASTYPDLGLPPEWYGALEWVFPEWARRH
ALDKGEAVNFLKGAVVTADRIVTVSKGYSWEVTTAEGGQGLDELLSSRKSVLNGIVNGID
INDWNPATDEHIPYHYSADDLSGKAKCKAALQKELGLPIRPDVPLIGFIGRLDYQKGIDL
IKLIMPNLMQDDIQFVMLGSGDPELEDWMRSTESNFRDKFRGWVGFSVPVSHRITAGCDI
LLMPSRFEPCGLNQLYAMQYGTVPVVHATGGLRDTVENFNPFGDNGEQGTGWAFAPLTTE
NMLWTLRTAVSTYREHKSSWEGLMKRGMSKDFTWDHAAEQYEQIFQWAFIDQPYVR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggccgtgagcgccgcgtgcctcctcctcgcgcgggccgccggggccccg
gggaccaggcggggcggcggcgaccaggcgcgcccgcggcggctccagcgggcggtgcgc
cggcgctgcgtcgcggagctcagcagggagggccccgcgccgcgcccgatgccgcagctg
gcgcccccgctcgtgcccggcttcctcgcgccgccgcgcgacgagcccgcgcccgcgcgg
gagccggcgtcgacgccgccgcccgtgtccgacgacggcctgggggacctcgacctcggc
ctcgaactggaagagattgctgaaaattccatcaacaacacagtagttgtggcaagtgag
caagactctaagatcatggttggaaaggagcaggaatctgagatcatggttgggaaggag
caagctcgagctaaagtaacacatagcattgtctttgtaactggtgaagcttctccttat
gcaaagtcagggggtctaggagatgtttgtggttcactaccagttgctcttgctgctcgt
ggtcaccgagtgatggttgtaatgccaagatatttaaatggtacctctgacaaaaattat
tcaaatgcattttacaccgagaagcacattcggattccatgctttggcggtgatcatgaa
gtaacctttttccatgagtatagagattctgttgattgggtgtttgttgaccatccctcg
tatcacagacctggaaatctatatggagataagtttggtgcgtatggtgataatcagttc
agatacacactcctttgctatgctgcatgtgaggctcctttggtccttgaattgggaggg
tatatttacggacagaattgcatgtttgttgtgaacgattggcatgccagccttgtgcca
gtccttcttgctgcaaaatatagaccatttggtgtttataaagactcccgcagcattcta
gtaatacataatttagcacatcagggtgtggagcctgcaagcacatatcctgacctgggg
ttgccacctgaatggtatggagctctggagtgggtattccctgaatgggcaaggaggcat
gcccttgacaagggtgaggcggttaattttttgaaaggtgcagttgtgacagcagatcga
attgtgactgtcagtaagggttattcatgggaggtcacaactgctgaaggtggacaaggc
cttgatgagctgttaagttccaggaagagtgtgttaaacggaattgtaaatggaattgac
attaatgattggaaccctgccacggatgaacatatcccttatcattattctgctgatgat
ctatctggaaaggccaaatgtaaagctgcattacagaaggagctgggtttacctataagg
cctgatgttcctctgattggcttcattggaagattggattatcagaaaggaattgatctc
attaaacttatcatgccaaacctcatgcaggatgacattcaattcgtcatgcttggatct
ggtgacccagagcttgaagactggatgagatctacagagtcgaacttcagggataaattt
cgtggatgggttggatttagtgttccggtttcccaccgaataactgcaggctgcgatata
ttattaatgccatccaggttcgaaccttgtggtctgaatcagctatatgctatgcagtat
ggtacagttcctgttgtccatgcaactggggggcttagagacacagtggagaacttcaat
ccttttggtgataacggagagcagggtacagggtgggcgttcgcacccctaacaacagaa
aacatgctttggacattgcgaactgcggtttctacatatagggaacacaaatcttcctgg
gagggactcatgaagcggggcatgtcaaaagacttcacatgggaccatgctgcggagcaa
tatgaacaaatcttccagtgggccttcatcgatcaaccttatgtccggtaa
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