Panicum virgatum (switchgrass): 120669677
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Entry
120669677 CDS
T07260
Name
(RefSeq) AP-1 complex subunit sigma-1-like
KO
K12394
AP-1 complex subunit sigma 1/2
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120669677
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120669677
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Others
AP-1 complex
120669677
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clat_adaptor_s
Motif
Other DBs
NCBI-GeneID:
120669677
NCBI-ProteinID:
XP_039805420
LinkDB
All DBs
Position
4N:complement(40065172..40067809)
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AA seq
161 aa
AA seq
DB search
MINFVLLISRQGKVRLTKWYSPYTQKERTKVIRELSGLIITRGPKLCNFVEWRGYKVVYR
RYASLYFCMCIDADDNELEVLEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIA
GELQESSKKNVARLIAAQDSLVEAAKEEASSISNIIAQVTK
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgattaatttcgtgctcctgatcagccgccagggcaaggtgaggctcaccaagtggtat
tcgccttacacccaaaaggagaggaccaaggtcattcgtgagctcagtggactcattatt
acgcgagggcccaaactctgcaactttgtcgagtggagaggttacaaggtcgtatacagg
aggtatgccagtctgtatttctgcatgtgcattgatgctgatgacaatgagctcgaagtc
ctcgagatcatccatcatttcgttgagatactggaccgctattttggcagtgtatgtgaa
ctggatttgatattcaattttcacaaggcctactacatactggatgagattcttatcgct
ggcgagcttcaagaatctagcaagaagaatgttgcaaggcttattgctgcacaggactca
ttagttgaggctgcgaaagaggaagccagctccataagtaacatcattgctcaagttaca
aaataa
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integrated database retrieval system
