Panicum virgatum (switchgrass): 120669687
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Entry
120669687 CDS
T07260
Name
(RefSeq) EIN3-binding F-box protein 1-like
KO
K14515
EIN3-binding F-box protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120669687
04075 Plant hormone signal transduction
120669687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120669687
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120669687
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GFIT
Motif
Pfam:
LRR_4
LRR_At5g56370
LRR_RPS2
LRR_6
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
120669687
NCBI-ProteinID:
XP_039805438
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Position
4N:40290499..40293624
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AA seq
627 aa
AA seq
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MSPFQGYRGDGVLAGVRSRKRVFASAADEPVTATAPRRQKRREEPSLDALPDECLFEVLR
RVRGARARCASACVSRRWLALLAGIRASEAVLAPPFPAVPDLNMEYLGGEEEEADLMDHD
GDARERTFEGKEATDARLMAAAVAGRLAAVSVRGSHPARGVTDSSISALARGCPALRSLA
LWDVPQVTDAGLAEIAAECHALERLDITGCPLVTDKGLITVAQGCPELKSLTIEACSGVA
NEGLKAIGRCCAKLQAVNIKNCTHVDDQGVSGLICSATASLTKVRLQGLSITDASLAVIG
YYGKAITDLTLARLPAVGERGFWVMANALGLQKLRCMTVTSCRGLTDLALASVAKFSPSL
KHVNLKKCSKVSDGCLKEFAESARALENLQVEECNKVTLMGILAFLLNCSPKFKALSLVK
CIGIKDICSAPAQLPVCKSLRSLTIKDCTGFTDASLAVVGMICPQLENVNLSGLGAVTDN
GFLPLINSSESGLVNVDLNGCENLTDAAVSALVKVHGCSLAHLSLEGCSKITDASLFAIS
ESCSQLAELDLSNCMVSDYGVAVLAAAKQLKLRILSLSGCMKVTQKSVPFLGSMSSSLEG
LNLQFNFIGNHNIASLEKQLWHCDILA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgttccagggatacagaggtgatggggttctcgccggcgtccggtcgcggaag
cgcgtgttcgcgtcggcggccgacgagcccgtgacggccaccgcgcccaggcggcagaag
cggagggaggagccgtcgctggacgcgctcccggacgagtgcctcttcgaggtcctgcgc
cgcgtgcggggcgcccgcgcgcgctgcgcctccgcctgcgtctcccgccgatggctcgcg
ctcctcgccggcatccgcgcctccgaggccgtgctggccccacccttccccgccgtgccg
gacctcaacatggagtacctcggcggcgaggaggaggaggccgacctcatggaccacgac
ggcgacgcccgcgagaggaccttcgagggcaaggaggccacggacgctcgcctcatggcc
gcggccgtcgccggccgcctggccgccgtctccgtccgcgggagccacccagcgcgcgga
gtcaccgactcgagcatctccgcgctcgcccgcggctgcccggcgctccggtccctcgcc
ctgtgggatgttccgcaggtgaccgatgctgggctcgctgagatcgccgccgagtgccac
gcgctggagcgtctggacatcactggctgcccgctggtcacggacaagggcctcatcacc
gtcgctcagggttgcccggagctgaaatccttgaccatcgaggcatgctccggtgttgcc
aacgagggtctcaaggcgatcggccggtgctgtgctaagctgcaggcggtgaacatcaag
aactgcactcatgttgatgaccagggtgtgtctggcctcatctgctccgcaaccgcctca
ttgaccaaggtccggctccagggtctgagcattactgatgcttctcttgcggtgattggg
tactacgggaaggctatcacagacctcaccctcgctcgcctcccagcagttggtgagagg
ggattttgggtgatggccaatgccctgggcctgcagaagctcagatgtatgactgtcacc
tcctgccggggactcacggatcttgctcttgcatctgttgccaagttcagcccaagtttg
aagcatgttaacctcaagaagtgcagcaaggtctccgatggttgcctcaaggaattcgcg
gaatcagcaagggctctggagaacttgcaggttgaggaatgcaacaaggttactctcatg
ggcattcttgctttcctcctcaactgcagcccgaagtttaaggctctctctttggtaaaa
tgcattgggattaaggacatctgctctgcacctgcacagcttccagtatgcaagtcgctt
cgctccctgaccatcaaggattgcacaggtttcactgatgccagcttggccgtggtgggc
atgatctgccctcagttggagaatgtcaatttgagcggtcttggtgcagttaccgacaat
ggcttccttccgttgatcaacagttctgagagcgggctggtcaacgttgatttgaatggc
tgtgagaatctcacagatgcagctgtttctgccttggtgaaggtgcacggttgttctctt
gcacaccttagccttgagggctgcagtaagattactgatgcaagcctgtttgcaatctct
gagagctgcagccagcttgccgagcttgatctttcaaactgcatggtcagcgactatggt
gttgcggtcttggcagcggcaaagcagctcaagcttcgtatcctctcactgtctggttgt
atgaaggtcacccagaagagtgttcctttcttaggcagcatgtcttcatccttggaggga
ctcaatctccagttcaacttcatcggcaaccacaacatcgcttcgttggagaagcagctc
tggcattgcgacatccttgcttag
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