Panicum virgatum (switchgrass): 120669699
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Entry
120669699 CDS
T07260
Name
(RefSeq) 26S proteasome regulatory subunit 10B homolog A-like isoform X1
KO
K03064
26S proteasome regulatory subunit T4
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120669699
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120669699
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
120669699
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
RuvB_N
AAA_5
AAA_2
AAA_22
nSTAND3
DUF815
OB_PRS7
AAA_14
TIP49
AAA_7
Prot_ATP_ID_OB_N
Parvo_NS1
RNA_helicase
AAA_18
Mg_chelatase
AAA_3
NACHT
AAA_33
AAA_28
NPHP3_N
AAA_lid_PRS2_C
TsaE
AAA_24
ATPase
eIF-1a
Sigma54_activat
bpMoxR
IstB_IS21
ABC_tran
ATPase_2
AAA_11
DUF5906
AAA_25
PhoH
NB-ARC
Motif
Other DBs
NCBI-GeneID:
120669699
NCBI-ProteinID:
XP_039805453
LinkDB
All DBs
Position
4N:40422944..40428407
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AA seq
398 aa
AA seq
DB search
MAEGGEDVRRRAAVAEYRKKLLSCRELEARAKTGRENQKNAKKNLGKTEEDLKALQSVGQ
IIGEVLRPLDKERFIVKASSGPRYVVACRSKVDKEKLIAGTRVVLDMTTLTIMRTLPREV
DPVVYNMLHEDPGNISYSAVGGLSDQIRELRESTELPLMNPELFLHVGIKPPKGVLLYGP
PGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEI
DAIGGRRFSEGTSADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRL
DRKIEIPLPNEQGRMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAI
RAERDYVIQEDFMKAVRKLNEAKKLESRAHYSADFGKE
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggtggggaggacgtgcgccgccgcgccgcagtcgccgagtaccgcaagaag
ctcctcagctgccgggagctcgaggcgcgggccaaaacagggagggagaaccaaaaaaat
gcaaagaaaaacttgggaaaaactgaagaggatctcaaagcattgcaaagtgtgggccaa
attattggtgaggtgcttagacctttggacaaggaacggtttatcgtgaaggccagcagt
ggaccacgctatgttgttgcttgccgaagtaaagttgacaaagaaaagttgattgctggt
acaagagttgttcttgacatgacaacgcttactatcatgcgcactttgccacgtgaggtt
gaccctgtggtttacaacatgctacatgaagatcctggcaatattagttactcagctgta
ggtggcttgtcagatcaaataagggaactcagagaatccactgagttaccgcttatgaat
ccggaactgtttctccatgtagggattaagccgccaaagggtgtgctactctatggtcca
cctggaactgggaagacgctcctagctagagccattgctagcaacatcgatgctaacttt
ttgaagatagtttcaagtgctatcattgacaagtatattggtgaaagtgcacgcttgatt
cgtgaaatgtttaactatgcacgtgagcatcagccatgcatcattttcatggatgaaatc
gatgccattggtggccgaagatttagtgagggcacaagtgctgatcgtgagattcaaagg
acattgatggagcttttaaatcagctagatggattcgatgagcttgggaaggtgaaaatg
atcatggcaacaaacagacctgacgttttggatcctgcgctccttcggcctgggcgattg
gacaggaagatcgagatcccgctcccgaatgagcaggggaggatggaggtcctcaagatt
cacgcagctggcatcgccaagcatggcgaaatcgactacgaagctgttgtgaaactggct
gagggtttcaacggcgctgatctgcgcaacgtctgcacggaagctggcatggctgccatt
cgagcagagcgcgactatgttattcaggaggacttcatgaaggcggtgcgcaagctgaac
gaggccaagaagctcgagtccagagcgcactacagcgctgacttcggcaaggagtga
DBGET
integrated database retrieval system
