Panicum virgatum (switchgrass): 120669751
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Entry
120669751 CDS
T07260
Name
(RefSeq) glutamate receptor 2.8-like isoform X1
KO
K05387
glutamate receptor, ionotropic, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pvir04040
]
120669751
Ion channels [BR:
pvir04040
]
Ligand-gated channels
Glutamate (ionotropic)
120669751
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Peripla_BP_6
Lig_chan-Glu_bd
SBP_bac_3
DUF6170
Motif
Other DBs
NCBI-GeneID:
120669751
NCBI-ProteinID:
XP_039805530
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Position
4N:complement(7066441..7071326)
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AA seq
798 aa
AA seq
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MSLMYTVLCADVLAADDLIRNDKVQAIIGPLTSAEAEYIAYLGNRTLTPILSLAPVSAAL
APSLTPFFLHTAPIASSQAKLIAAILDMFKWRTASLIYEDSTYGAGITPELVYILQGYNT
RVTDSLALPIDATESYLDTLLYHLKENSTRVFIVHMLPDLAARVFHRASVANMMSDGYVW
IATAGIGSAVDSLGPDRFHDMQGVVTFRPYVPATDRVMNFTVRFKERFLLENSGIRDVPN
PSVPLLWAYDTAWSLAAAINKYSVSSSTPGTGRTLLGAVLNTTFDGLAGRFRLVNGQLQL
STYEVVNIIGKSARTVGFWTPESGIFKNLKATNEKGIKQILWPGDLAIAPSGWSMSSTGR
PLRIAVPSRLGFNQLVEVSYSLRTNTSFVTGYCIDVFDALVKNLPYPVAYQYVPSTIYSS
YEELLSLVFEKKADVMVGDTTISMSRMNKVAFTMPFTDTGLSMIVVLKKDSSGSMWIFLQ
PLTSTLWITSLAFFFLTGFVVWAIEHRINPEFHGTPWQQFGIIFYFAFSTLVFSHKEKLE
SNLSRFVVIVWVFVVLILTSSYTASLTSMLTVQRLQPTVTSVQDLLRNGDRVGYQNGSIV
KYWLEEMGFHKKDLLGYVEVEEYAEALQRGSGNGGVSAIVDEVPYLKIFLSKYCEGYTMV
GPTYKLGGFGFAFPIGSPMAHDVSQAIMTPAVQQEMAWIERKWFGDPGACESKSGGINSF
RLSFSNFGGLFLITGMTSGLALLISLSIFVYQERDKLRAALSRTRSMSLQRLHTWLERLG
STEHTKSTINHQEADRRV
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaatgtatactgtgctgtgtgctgatgtgcttgcagccgatgatctaatcaga
aacgataaggtgcaagcaattattgggcctctgacttcagcagaagctgaatacattgct
taccttgggaatcgcacactcactccaatcctctcactcgctccagtttctgcagcatta
gcaccatcattaacaccattctttctgcatactgcacccattgcctcctctcaggccaag
ttgattgctgccatccttgatatgttcaaatggcggacagccagcttaatctatgaagac
tcaacatatggagctggcattaccccagagcttgtatacatccttcagggttacaacact
cgggttacagatagtttagctttgcccattgatgcaactgagagctacctggacacatta
ttataccacctcaaggagaattccacacgggtatttattgtgcacatgctcccagacctt
gctgctcgtgtcttccaccgggccagtgttgccaatatgatgtctgatggttatgtctgg
atagccaccgccggtattggcagtgcagtggacagccttggtcctgacaggtttcatgac
atgcaaggggttgtcaccttccgaccttatgtcccggcaactgaccgtgtgatgaacttc
actgtaaggttcaaggagaggttcctgctggagaattcgggcattcgagatgtgcctaac
ccaagtgtgcctctgctctgggcgtatgatacagcatggtctcttgctgcagcaatcaat
aaatacagtgtgtccagctcaacacctggaactggaagaacacttctaggtgcagtgctc
aacacaacatttgatgggttggctgggaggttcaggcttgtaaatggccaattgcagcta
tcaacatatgaggttgttaacatcatcggtaaaagtgcaaggacagttgggttctggaca
cctgaatctgggatcttcaagaatttaaaggccaccaatgagaaagggatcaaacaaatc
ctctggccaggtgatctagcaattgctccaagtgggtggagcatgtcttcaacaggaagg
ccgcttcgtattgcagtaccttcaaggcttgggttcaatcagcttgtggaggtttcctac
agcctgagaaccaacacttctttcgtcacaggttactgcatcgatgttttcgatgcgctg
gtgaagaacctaccctatccggtggcctaccaatatgtgccatctactatttacagcagt
tatgaagaacttctcagtctggtgtttgaaaagaaagctgatgtcatggttggtgacacg
acgatttcgatgagcaggatgaataaggtggccttcacaatgcccttcaccgacacaggg
ctgtcgatgatcgttgtactgaagaaagattcgagcgggagcatgtggatctttctacag
ccactgactagtaccctctggatcaccagccttgccttcttcttcttaacaggttttgtt
gtgtgggcaattgagcaccgaataaaccctgaattccatggcacaccttggcaacaattt
ggcatcattttctactttgccttctcgactcttgtcttctcccacaaggagaagctggag
agcaacctatcaagatttgtggtgatcgtatgggtattcgtcgtgcttatcttgacctca
agctatacagcgagtttgacatcaatgctgacagtccagcgactccagccaactgtgact
agcgtgcaagatcttctaagaaatggtgaccgtgtggggtaccaaaatggttctattgtc
aagtattggctggaggaaatgggcttccacaagaaggacttgctgggttatgtcgaagta
gaggagtatgctgaggccctccaaaggggatcaggcaacggaggggtctctgcaatagtt
gacgaagtcccctacctgaagatattcctgtcaaagtactgtgaaggttacaccatggtt
ggcccaacctacaagttgggaggctttggatttgcttttccaatagggtcacccatggcg
cacgatgtatcacaggccatcatgacacccgcagtgcagcaggagatggcgtggatagag
aggaaatggttcggtgacccaggagcctgtgagagcaagagcggcggcatcaactcgttc
aggctcagcttcagcaactttggtgggctgttcctcattactggcatgacctctggtctt
gcccttctcataagccttagcatcttcgtttaccaggagcgagacaagctcagggctgca
ttgtctcgcaccaggtcgatgtcgctgcagaggctgcacacatggcttgaacgccttggc
agcaccgagcacaccaagtcaaccatcaatcatcaagaagcagataggcgagtatga
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