Panicum virgatum (switchgrass): 120669778
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Entry
120669778 CDS
T07260
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120669778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120669778
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120669778
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
120669778
NCBI-ProteinID:
XP_039805559
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All DBs
Position
4N:complement(23043086..23049696)
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AA seq
567 aa
AA seq
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MVLIPFVRDYIDRMLHDIPGMKVLALDPQTVGMVSVVYSQSDLLRKEVFLVETMDNASSS
RESMAHLKAVYFLRPSTDNVQKLRRHLAMPRFAEYHLFFSNILKIPQIQILADSDEQEVV
QQVQEFYADFCAIDPYHFTLNIQNNHMYMLPTVVDPPGMQSFCDRAVDGIASVFLALKRR
PVIRFQRTSDVAKRIAQETARLMYEQECGLFDFRRTENSSLLLVIDRRDDPVTPLLNQWT
YQAMVHELIGIENNKVDLRGFANVPKDQQEVVLSSVQDDFFRANMFENFGDLGMNIKRMV
DDFQHLSKSSLILQSIGDMAKFVSNYPEYRKTHGNVTKHVALVSEMSRIVEERKLMLVSQ
TEQELACTSGQAAAFEAVTSLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLAS
CSAKYKSGLVQFLLKQAGVDKRTGDLYGNRDLLNIARNMARGLKGVENVYTQHQPLLFQT
MEGIVKGRLRDADYPLVGNHFQQGRPQDVVIFIVGGTTYEEARSVALYNAANPGVRFFLG
GSVVLNSKRFLEDLGEAQRISKSSTII
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgatccctttcgtccgcgactacatcgatcgcatgctccacgacatcccggga
atgaaggtcctcgccctcgacccccaaaccgttgggatggtgagtgtggtgtacagccag
tcggatctgctgcggaaggaggtgtttctcgtggagacgatggacaacgcctccagctct
agggagtccatggcgcacctcaaggctgtctacttcctccgaccctccaccgacaacgtc
cagaagctccgcaggcacctagccatgccgcgcttcgccgagtaccacctcttcttctcc
aatatattgaagattccgcagattcagatattagctgattctgatgagcaggaggttgtt
cagcaagttcaggagttctatgctgatttttgtgccattgacccataccatttcactctc
aacattcaaaataaccatatgtacatgcttccaacggtggtcgatcctcctggcatgcag
agcttttgtgatcgagctgttgatggcattgcttctgtcttcttggctctcaagcgtcgc
cctgttattagatttcagaggacatcagatgttgcaaaaaggatcgcacaagaaactgcg
cgattgatgtatgagcaggagtgtggcctgtttgattttagacgaacagaaaactcttcg
ttgttgttggtgattgacaggagggatgatcctgttacgcctctacttaaccaatggaca
tatcaggcaatggtacatgagcttattggaattgagaacaacaaagtggatcttagggga
tttgccaatgtacctaaagaccagcaggaggtggttctatcatcggttcaagatgatttt
tttagagctaacatgtttgagaattttggggacctcggtatgaacatcaaaagaatggta
gatgactttcagcatctttcaaagagcagccttattctccagagtataggtgatatggca
aagttcgtgagcaactatcctgaatatcgaaagacacatggaaatgtaacaaaacatgtc
gctttggtgagtgagatgagcagaattgtggaggaaaggaagcttatgctagtttcacag
acagaacaagagcttgcatgtacgagtggacaagcagcagcctttgaggctgtcacttcc
ttgctaaacaatgaaagtgtgtctgatattgaccgattacgactagtgatgctctatgct
ttgcggtatgaaaaagagagtccagttcaactgatgcagcttttcaacaaactggcttct
tgttctgccaaatacaagtctgggcttgttcaattcctccttaagcaggctggtgttgat
aagagaacaggcgacttgtatgggaaccgtgatctattaaatattgctcgtaacatggct
cgtgggcttaagggagttgagaatgtctacacccaacaccagcctcttctattccaaact
atggaaggaattgttaaaggtcgattgcgagatgcggactatccacttgttggcaaccat
ttccagcagggcaggcctcaagatgtggtaatattcattgttggagggacaacttatgag
gaagcaagatcagtagccctttataatgcagcaaatcctggagttcgtttcttccttgga
ggttcagtggttctgaattcaaaaagatttcttgaagatttgggggaggcacaaaggata
tcgaaatcaagcactataatatga
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