Panicum virgatum (switchgrass): 120669842
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Entry
120669842 CDS
T07260
Name
(RefSeq) ribosomal RNA small subunit methyltransferase G-like
KO
K03501
16S rRNA (guanine527-N7)-methyltransferase [EC:
2.1.1.170
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120669842
03036 Chromosome and associated proteins [BR:
pvir03036
]
120669842
Enzymes [BR:
pvir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.170 16S rRNA (guanine527-N7)-methyltransferase
120669842
Ribosome biogenesis [BR:
pvir03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
120669842
Chromosome and associated proteins [BR:
pvir03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
120669842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GidB
Methyltransf_4
Methyltransf_16
Methyltransf_31
DUF5071
MTS
Motif
Other DBs
NCBI-GeneID:
120669842
NCBI-ProteinID:
XP_039805638
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Position
4N:10968522..10971023
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AA seq
284 aa
AA seq
DB search
MSLCCCSTAAGRGFFLPSILLSRRRHPLLNLRTTATVAPAPAAAAATSISSLSARQQRQV
TVYVEALLDWNQRMNLTAVTDEAEVMTRHVEDSLAVLPPLERAYRARSTSGGRDTDGVSL
VDVGSGAGLPGLILAVARPSWRFTLLESMKKRCTFLEHAIEAMGLSNVDVVCDRAENVGQ
SLDYREAYDIAAARAVAELKVLAEYCLPLVRVGGLFIAAKGHDPHEEIKNAKSAVQKLGA
SMLELCNVESMGPHGQRTAVIYFKERATPKKYPRLPGTPSKMPL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctctgctgctgcagcaccgccgccgggcgaggcttcttcctccctagtatcctc
ctgagccggcgccgacaccccctcctcaacctccgcaccaccgcaaccgtcgcccccgcc
cctgccgccgccgccgccaccagcatctcctccctctcggcacggcagcagcgccaggtc
accgtctacgtggaagctctcctcgactggaaccagaggatgaacctcaccgccgtcact
gacgaggccgaggtcatgacgcgccacgtggaggactccctcgccgtgctgcccccgctg
gagcgtgcgtaccgcgcccgctccacctccggcggccgcgacaccgacggcgtcagcctt
gtcgacgtcggttccggggccgggctgccgggccttatcctcgccgttgcaaggccaagc
tggcgatttacactactggagtcgatgaagaagcggtgcacgtttctggagcacgccatt
gaggccatggggttgtcaaatgtggatgtggtgtgtgaccgggcggagaatgttggccaa
agtcttgattacagagaagcatatgatatagcagctgcaagagccgtcgcagaactgaaa
gttctggcggaatactgccttccattggttcgtgttggtggtttgttcatagctgcaaaa
gggcatgatccccatgaagaaataaaaaatgctaaaagtgctgtacagaaattgggtgct
tccatgctcgaattgtgtaatgttgaatcaatgggacctcatggtcagcggacagctgtt
atatactttaaagaacgagctacgccaaaaaaatacccgcgccttcctggtactccttcc
aaaatgccattatga
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