Panicum virgatum (switchgrass): 120669884
Help
Entry
120669884 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-like
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120669884
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120669884
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120669884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH_4
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCCH_3
zf-C3HC4
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_4
zf-CCCH_9
zf-rbx1
IBR_1
ETS_PEA3_N
Motif
Other DBs
NCBI-GeneID:
120669884
NCBI-ProteinID:
XP_039805702
LinkDB
All DBs
Position
4N:complement(16535636..16545556)
Genome browser
AA seq
368 aa
AA seq
DB search
MSTHRVLCKFFMHGACLKGEYCEFSHDWKDQANNVCTFYQKGACSYGSRCRYDHVKVSRN
PTVPLPSPSSSTARPSSTYLQLSSSGHPPRTGHQTDSKNQRNQISVDVPAHSASKPAWRN
DFQHVVSEDGIDWSSNQTLQNQTSLKPADLPICSFAAAGNCPYGEGCPQMHGDICSTCGK
MCLHPYRPDEREEHIKLCEKNHKRLESLKRSQEIECSVCLDCVLSKPTAAERKFGLLSEC
DHPFCIACIRNWRSNSPASGMDVNSALRACPICRKLSYYVIPSVLWYFSKEEKEEIIESY
KSKLKSIDCKYFDFGTGSCPFGTSCFYRHAYRDGRLEEVVLRHLDADDGSTVIAKNIRLS
DFLSRMHL
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacccatagggttctttgcaagttcttcatgcatggagcttgcttgaaaggagag
tattgtgagttctcccatgactggaaagatcaagcgaataatgtttgcacattctaccag
aaaggtgcatgctcatatggtagccgttgcagatatgaccatgtcaaagtttctcgtaac
cctacagtgcctctgccatcaccatcgtcaagtactgcaagaccctcatctacttatctt
caactttcaagttctggtcatcctcctcgcacgggacaccaaacagattcaaagaatcaa
agaaatcagatatctgtagatgtgccggcacattctgccagtaagcctgcatggagaaat
gattttcaacacgttgtttccgaggatggaattgactggtcctctaaccaaactttgcaa
aaccagacatcattgaaacctgctgatctgcctatttgttcttttgctgctgctggcaat
tgtccttatggggaagggtgccctcaaatgcatggagatatttgcagtacctgtggaaaa
atgtgcttgcatccttatcgtcctgatgagagggaggagcatatcaagttatgtgagaaa
aaccacaaacgccttgaatctctgaaacgcagccaagagatagaatgcagtgtctgtttg
gattgtgtgctatcaaagcctactgctgctgaaagaaagtttggactattatctgaatgt
gatcatcctttctgtatcgcatgcattagaaattggcgtagcaattctcctgcatctggt
atggatgtgaattcagcactaagggcatgtccaatatgtcgcaaactttcgtactatgtc
attccaagtgttctttggtacttctcgaaggaagagaaggaggagatcattgaaagctac
aaatccaagctcaagtctatagattgcaagtacttcgattttgggactggctcatgcccc
ttcggtacaagttgtttctacaggcatgcctatagggatggacgcttggaagaggtcgta
ctgcggcatcttgatgctgatgatggaagtacagtaattgcaaaaaatatcaggctgtcg
gatttcctcagtcggatgcatctttag
DBGET
integrated database retrieval system
