Panicum virgatum (switchgrass): 120669901
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Entry
120669901 CDS
T07260
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic-like isoform X1
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120669901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120669901
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
120669901
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120669901
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
Alpha-amylase
CBM_48
PI4KB-PIK1_PIK
Motif
Other DBs
NCBI-GeneID:
120669901
NCBI-ProteinID:
XP_039805727
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All DBs
Position
4N:26175331..26230642
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AA seq
970 aa
AA seq
DB search
MASCPLFLMTPRYPAALVDAGHYPPLAGSADLPTSRRPRPRPGRRYGYRCNSSSSSAPRD
RPPRPRQQRQRSQRPGSRGDAVDPVGFLAKLGISDRAFAQFLRDRHKALKDRRWELCSRF
IDLKEASSGFELLGMHRHRQHRIDFMEWAPGARYCSLVGDFNEWSATENCAREGHLGHDD
FGYWFIILEDKLRDGQEPDEYFFQEYNYVDDYDKGDNGVDAEEIMHRMKEEYWEPGEIRS
RKSQLEMVVKLYEQMFGPNGPQTEEELGEIPDAQTRYNEWKALQKADSSSLSPSYDIIDN
LQPFDIFNVVTDRASFEKFQAKKPPLAYWVEMRKGRKAWLEKYVPTIPHKDKYRVYFNTP
DGALERVPSWATYVLSDAEGKQSYAVHWEPPPEEIYKWRFGRPKVKGSLRIYESHVGISG
SEQKVSSFQEFTSKVLPHIKYAGYNAVQLIGIVEHKDYSSVGYKVTNYFAVSSRFGTPDD
FKKLVDEAHGLGLVVLLDIVHSYASADELVGLSLFDGSNDCYFHSGKRGHHKYWGTRMFK
YDDVDVLHFLLSNLNWWVTEYQIDGFQFHSLSSMLYTHNGFSTFTGAMEEYCNQYVDKDA
LIYLILANEMLHDLHPDIITIAEDATFYPGLCEPTTQGGLGFDYCVNLSVPEMWLWHLEN
VPEREWSMNKIMKVLVSRNQNMLSYVENHNQSISGRKSFAEIILNSGKFLIRSVDDGLME
ASLLKIIKLITFTTSGGAYLNFMGNEFAHPNRVEFPMSSNDYSFRLANRQWELLDKGFHK
HFFDFDKDVMSLDENERIISRGSPSIHHCNDTSMVICFTRGPFLFVFNFNPEVSYQSYHV
GVDEAGEYQEVVASSKPAIICLQENRLVSVSSVMLLSTVGAVFDHFVTLPASGLSGIRGK
IVIAWRGSICRATGTRVDSYSASVRYTLEDGQGWWCNKSGWSSLGKAGFQLLTPSQHEVD
FQRWWRKASR
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtgccctctattcctcatgaccccgcgctaccccgccgctctcgtcgacgcc
ggccactacccacccctcgcgggcagcgccgacctcccaaccagtcgtcgccctcgccct
cgccccggacggcggtatggttaccgttgcaactcgtcttcctcctccgcgccgcgcgac
cgcccgcccagaccgcggcagcagaggcagaggtcgcagcgccccggcagccgaggtgac
gccgtcgaccctgtgggcttcctcgccaagctcggcatctcggaccgcgcctttgcccag
ttcctccgcgaccggcataaggctttgaaggaccgcagatgggagttgtgctctcgattt
attgatctgaaagaggcgtcctctgggtttgaattgttgggcatgcaccggcatcgacag
caccgcattgatttcatggaatgggctccaggtgctcgctattgttcattggttggtgat
tttaatgagtggtcggcaactgaaaactgtgccagggaaggtcatttaggacatgatgat
tttggatattggtttatcatacttgaagataagctcagagacgggcaagaaccagatgag
tattttttccaggaatacaattatgtggatgattatgacaaaggtgacaatggtgttgat
gctgaagaaataatgcataggatgaaagaagagtattgggaacctggagaaatcaggtcc
cgcaagtctcaattagagatggttgttaagctatatgagcaaatgtttggcccaaatggt
ccacaaacagaggaggagttaggtgaaattcctgatgcccaaacaagatacaatgagtgg
aaagccttgcagaaggctgactcttcaagcttgtctccttcatatgatatcattgacaat
ttacagccgtttgacattttcaatgttgtaacggatcgagcatcattcgaaaagtttcaa
gcaaagaaacctccccttgcttactgggttgaaatgaggaagggacgaaaagcatggctt
gagaaatatgtcccaactatacctcataaagacaagtacagagtttattttaatactcct
gatggtgctttagaacgtgttccttcttgggctacatatgttctttcagatgctgaagga
aagcaatcctatgcagtacattgggaacctcctcctgaagaaatttacaaatggagattt
ggacgtccaaaggtgaagggttcacttagaatatatgaatcccatgttggcattagtgga
tcggagcaaaaagtttcatcatttcaggagttcacgtccaaagttcttcctcatataaaa
tatgctggatataatgctgttcaactaattggcattgtggagcacaaggattactcctct
gttggctataaggtaactaactattttgcagtcagcagcagatttggcaccccggatgac
tttaagaaactggtcgatgaggcacatggccttgggttagtggtgcttctggatattgtc
cactcctatgcatcagcagatgaactggttggcttatcgctttttgatggttccaatgac
tgttacttccacagcggaaaaagagggcatcacaagtattggggcaccaggatgtttaaa
tatgatgatgtggatgttctgcacttcttattgtccaatttgaattggtgggttactgaa
taccagattgatggattccagtttcattcattgtcttctatgttatatactcataatggg
ttttctacttttactggtgccatggaagagtattgcaatcagtatgttgacaaggatgca
ctgatatatctaattcttgcaaatgaaatgttacatgatcttcatccagatatcataaca
attgccgaagatgcaacattttatcctgggttgtgcgagccaacaactcaaggtggattg
ggattcgactactgtgtcaatctttctgttccagaaatgtggttgtggcatcttgaaaat
gttcctgagcgagaatggagcatgaacaagattatgaaagtattagtaagcagaaaccag
aatatgctctcgtatgttgagaatcataaccagtccatatcaggacgcaagtcttttgct
gaaataattcttaattctggaaagttcttaattcgttctgttgatgatggtttgatggaa
gcttcattgctgaaaattatcaaactaattactttcacaacgagcggaggtgcttatcta
aacttcatgggcaatgaatttgcacatccaaatagagttgaatttcctatgtcaagcaat
gactattccttccggttagctaatcggcaatgggaactattggacaagggttttcacaaa
catttctttgactttgacaaggatgttatgagcttggatgaaaatgaaaggataatttcc
agaggttcacccagtattcatcactgtaatgacacaagcatggtcatatgtttcacaaga
gggccttttcttttcgtatttaatttcaatcctgaagtctcctatcagtcatatcatgtt
ggtgtggatgaagccggggaatatcaagaagtggtggcttcgtctaagcctgccataatt
tgccttcaggagaacagattggtgtctgtttcatcggtgatgcttctgtccacggtaggc
gctgtgtttgatcatttcgttaccctcccagcatccggcttgtccggcattagaggtaag
atcgtgatcgcttggcgagggagcatctgcagggcgacgggcaccagagtcgactcctac
tcagcttctgtgaggtacacactcgaggacggacaagggtggtggtgcaacaagtctggg
tggagttcccttggcaaggcgggcttccaactgcttaccccctctcaacatgaggtggac
ttccagagatggtggcggaaggcatcacgttga
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