Panicum virgatum (switchgrass): 120669904
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Entry
120669904 CDS
T07260
Name
(RefSeq) amino acid transporter AVT1I-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120669904
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120669904
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
120669904
SSDB
Ortholog
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Motif
Pfam:
Aa_trans
Trp_Tyr_perm
Spore_permease
Motif
Other DBs
NCBI-GeneID:
120669904
NCBI-ProteinID:
XP_039805734
LinkDB
All DBs
Position
4N:complement(11777529..11783245)
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AA seq
399 aa
AA seq
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MEDNTPPKFGTGFFKTCFNGVNALSGVGILSIPYALSQGGWLSLLIFMTIAIICFYTGIL
LQRCIDSSSLVKTYPDIGELAFGRKGKIIVAIFLYLELYLVSIDFLILEGDNLEKLFPNA
NFHVASLKIGSKQGFVLIFSLLVLPTTWLRTLNMLAYVAIGGVMASVILIASVLWVGVFD
GVCFHEKGVTVNWSGMPTAMSLYAFCFSGHAVFPMIYTGMRNRKTFPTVLLICFTICTLS
YGLTGIIGYLMYGESLNSQVTLNLPSKRFASNIAIYTTLINPFTKFALLITPIAEAIEDT
LHVGKNRTVSVLIRTALVVSTTIVALVVPFFAYVVALTGSFLSSTVTMLLPCACYLKISS
RTSKNLRLELVACLGIIMIGAGVIVVGTYYSLKQIVHSF
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaacactcctccaaagtttgggacaggcttcttcaaaacttgcttcaatgga
gttaatgctctctcaggggttgggatattatccattccatatgcattgtctcaaggagga
tggctgagcttactcattttcatgaccatagcaatcatctgtttctatactggtattctc
ctgcagagatgcatagactcaagctcgcttgttaagacctatcctgatattggtgagcta
gcttttggccggaaaggaaaaatcatagtagcaatattcttgtacctggagctgtatctt
gtttccattgatttcttgatattagaaggtgacaacttggagaaattatttccaaatgcc
aacttccatgttgctagtctcaagattggaagcaaacaagggtttgtgttgatcttcagc
ctgctggttttaccaacaacatggcttcggaccttgaacatgcttgcatatgttgctatt
ggcggagtcatggcatctgtcattctaatcgcctctgttctgtgggttggagtgtttgat
ggtgtctgttttcatgagaaaggtgtgactgtcaactggtctggtatgccaactgctatg
agcttatacgcgttctgtttcagcggccatgctgtttttcccatgatatacactggcatg
agaaacagaaaaacgttccccacagtgttgctcatctgcttcacgatctgcactcttagc
tatgggctaacaggcatcattggatacttgatgtacggggaatcattaaattcccaggtg
actctcaaccttccatcaaaacgttttgcctccaatatcgcgatctacacgacgctgatc
aaccctttcaccaagttcgcgctgctaatcactccaatagcagaggctatcgaggatacc
cttcacgttggcaagaacaggaccgtcagtgtcttgatcaggaccgccctggtcgtcagc
acgaccatcgtagcacttgtggtgccgttcttcgcctatgttgtcgcgcttacgggctcg
ttcctcagcagcacagtcaccatgttgctgccctgtgcctgctacctgaagatcagctca
aggacctccaagaatctgaggttggagctggtagcttgcctgggtattatcatgattggg
gcgggagtgattgtggtcggcacatattactcactgaagcagattgttcatagcttttga
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