KEGG   Panicum virgatum (switchgrass): 120669922
Entry
120669922         CDS       T07260                                 
Name
(RefSeq) RNA demethylase ALKBH9B-like
  KO
K10767  mRNA N6-methyladenine demethylase [EC:1.14.11.53]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pvir03019]
    120669922
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.53  mRNA N6-methyladenine demethylase
     120669922
Messenger RNA biogenesis [BR:pvir03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     120669922
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2
Other DBs
NCBI-GeneID: 120669922
NCBI-ProteinID: XP_039805762
LinkDB
Position
4N:2671542..2676159
AA seq 617 aa
MDMAPSSSSSGGGGGGGGGGADPMALVQGYTSEELAIAGEFLTTWLPFLSAGLCPSCVES
LRGRVDSLLPRDEESPPTPTLQIDQIEPTGWDSDPAPQKHPPFEPSGWDSDPPPPPPPQQ
QPAPAEKPRMSWADMAQEDELAAAAEEDAPAAAADDGEEGDEVGRPKVQLTRDQREQRRF
KNVVRKKDFICLERINGRLVNILEGIELHAGVFSSAEQRRIVECVYDLQERGRRGELGDR
TYTEPQKWMRGKGRVTIQFGCCYNYATDKNGNPPGIIQTIVSDPMPDLFKTMVKRLVRWQ
VLPPTCVPDSCIVNIYEPADCIPPHIDSHDFVRPFCTVSFLSECNILFGSNLRASAPGEF
TGSIAIPLPVGSVLVLNGNGADVAKHCVPAVPTKRISITFRKMDPAKRPFNFKDDPELLN
LTPLGTVVQEGGRSSNEGRSKLPDVQITNLSNLSRGKRSKGRTSSGKVGGGILGDQPPGH
DQAPAVEVLSRQSLHGQRPVSASSAERERSSGRWSREPRYQSNALGMQAQVDDIREWPHP
LPQERRHGNGINSSEDGVESVGRRPRVEHRQISLINRTINDDMDPLPISSRESGDQPHAS
GRTLYNKPRRTRVSLDD
NT seq 1854 nt   +upstreamnt  +downstreamnt
atggatatggcgccctcctcctcctcctccggtggcggcggcggcggcggcggcggcggc
gccgacccgatggcgctcgtgcaggggtacacgagcgaggagctggccatcgcgggggag
ttcctcaccacatggctccccttcctgtccgcgggcctctgcccctcctgcgtcgagtcg
ctccgcggccgcgtcgactccttgctcccgcgagatgaggaatcgccgccgacgccgacg
ctccagatcgatcagattgagccgacggggtgggactcggatcccgcgccccagaagcac
ccgcctttcgagcccagcggatgggattcggatcctccgccaccgccgccgccgcagcag
cagccggcgccggcggagaagccgaggatgtcgtgggcggatatggcgcaggaggacgag
ctcgctgcggcggcggaggaggacgcgccggccgcggcggctgatgacggggaggagggg
gacgaggttgggaggcccaaggtgcagctgacgagggaccagcgggaacagaggaggttc
aagaacgtggtgcggaagaaggatttcatctgcctcgagagaattaatggccgcctcgtc
aacatccttgagggcattgagcttcatgccggtgtattcagctcagctgagcagcggcgc
attgtcgaatgcgtatatgacctccaggagagaggcaggcgtggggagcttggagatcgc
acatacactgaacctcaaaaatggatgcgtggtaaaggccgggtaacaatccaatttgga
tgctgttacaattatgctacggataagaacggaaatccaccaggcattatacagaccatt
gtttctgatccaatgcctgatctctttaagactatggttaagagactggtacgatggcaa
gttctgccgccgacttgtgtaccagacagctgcattgtaaatatatatgaacctgcagat
tgcatcccaccacatatagatagccatgattttgttcggccattttgtaccgtttctttc
ctcagtgaatgcaacattctttttggatcaaacctgagagcttctgcccctggagaattc
actggttcaattgcgatccctctccccgtcgggtctgtgcttgtcctgaacggcaatggt
gctgatgtagcaaagcattgtgttccagcagtcccgaccaaaaggatatccattaccttc
agaaaaatggacccagcaaagcgtccattcaattttaaagatgatcccgaactgcttaac
cttacacctctagggacagttgtgcaagaaggtggcagatcatcaaatgaaggcaggagc
aagctacctgatgtccaaataacaaatctgagcaatctatccagaggcaagaggtctaaa
ggaagaacatcttctgggaaagttggaggcggcattcttggagaccaacctcctggacat
gatcaagctcctgcagtagaagttctgtcccggcaaagtctgcatggccagcgccctgtc
tctgcatcaagtgcagagagagaaaggagctctggcaggtggtcaagggaaccgagatat
caatctaatgctcttggcatgcaggctcaggtggatgatatcagagagtggccacatccg
ttgccacaagagagacggcatggcaatggtattaattccagtgaagatggtgtggaatct
gtgggaaggagaccacgggtggagcatagacagatctcgttgataaaccggacaataaac
gacgacatggatccccttccaatatcaagccgtgaatcaggtgaccagcctcatgctagc
gggcgaaccttgtataacaagccaaggaggaccagagtaagcctggatgactga

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