Panicum virgatum (switchgrass): 120669924
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Entry
120669924 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120669924
KO
K17302
coatomer subunit beta'
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120669924
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120669924
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
120669924
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
120669924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Motile_Sperm
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
120669924
NCBI-ProteinID:
XP_039805767
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Position
2K:complement(18202963..18239416)
Genome browser
AA seq
862 aa
AA seq
DB search
MDIPIPYKDLEVATNGFSERLGFGGFAEVFKGTYNGKDIAVKMFYPTLDVDDKVFLNEIV
NLQGVRHRNIIRSVGYCYVTESKVVKHYGKTIISGNKYKILCFEYLQNGSLEEYISKKSL
EHNWCMHYQLIKGICEGLLHLHEGREVPIYHLDLKPSNILLDQNMVPKLADFGLARPSLY
GSQILVTKNVIGTRKYMPPEFMSNNEITCKNDVFSLGIVIIEVMAGPSGYKEFEGMSSAQ
EYKRFVQKVCNIWRERLKSTMGGALLDVYFRQVKKCIEIAVQCVDFDKDKRPKVRVITEE
LRSLAAKEQAIASILKEPLHVAHHVQYNDQIPPYPTPPPPNVHPIDGQVCQKVEKNFAKL
QLCAAMESETVTPTSPGSFITELIDIYPSLLCFPFELNKCSKSRLSICNKTDNDVQFFVD
PKNYPEWYIHEKRLCGFVHSHFTCAFHVVMRERKKKPPRDNDEFEIYVKPIRHRHHLDIQ
HKKHLEMYDDESDKTNNNLAADEARDKYVTLKGVVLFRDPDPAARHWGEVKLDDEYFGYL
TSMDVHPTEEWVLMGYEGGYICIWRNLSRKVVAGSKEAHPEGAHDYRFIVEECHQKGCGP
CRSVKFIASMQWVVSGHSNGVILVHTYNDGEPKQVERVEAHEGAVTSLAVHPSQPLVLSS
SDDGTIRLWNWSEDWSCTREFRRQKGTVLQVAFNPRDASTFATVTTLPRTVKTWSIDSDD
PVKIWKMKVESIAYFTSNNIGCYMAISMQEGRTKILDMESMTYVHTLQILDVRSETSSLL
VPPRDTAITAVACHPKYPIIITGTSEGNVFIWNYSTYRLKESLWFGEDKVEGFGFMEIEG
SFTRLLIRYADRIEMVDVEWSR
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggacatacccattccgtataaggacttagaagttgctacaaatggattctcagaaagg
cttggatttggcggctttgcagaggttttcaagggtacatacaatgggaaagacattgct
gtgaagatgttttatcctacgctagatgttgatgacaaagtgtttctgaatgaaattgtt
aacctgcaaggggtccggcatcgaaatattatacgatcagttggctattgctatgtgacc
gaaagtaaagttgttaaacattatggaaaaactattatatctgggaacaaatataaaatt
ctctgctttgaatatttgcagaatggaagccttgaggagtatatttctaaaaaatcttta
gaacacaattggtgcatgcattaccaactaataaagggcatttgtgagggcctactacac
cttcatgaaggacgtgaagtacccatttatcatctagatctaaaaccgtcaaacatatta
ctcgatcagaacatggtcccaaagctagcagattttggattagcgaggccatcattatac
ggatcacagatactagtcacaaaaaatgttattggaacacggaaatatatgccaccagaa
ttcatgagtaacaacgagatcacatgcaagaatgacgttttcagtttaggtatcgtaatt
atagaggtaatggcaggacctagtggttacaaagaattcgagggaatgtcttctgcgcaa
gaatacaaacgttttgttcagaaagtatgtaatatctggagggaaaggttaaagtcgaca
atgggaggtgcattactagatgtatatttccgtcaagtgaagaaatgcattgaaatagca
gtacagtgtgttgattttgataaagataagaggccaaaagtacgtgttattactgaagaa
ctcagatcgttggcggccaaggaacaggcaattgcttctatcttaaaggagcctcttcac
gtagctcaccatgtgcaatacaatgatcaaataccaccatacccgacgccacctcctcca
aatgtgcatcctattgacggccaggtctgtcaaaaagtcgaaaagaattttgcaaagctg
cagctgtgtgcggccatggaatcggaaaccgtaacgccgacgagccctggctcctttatc
acagagttgatagatatctacccctcactcctctgcttcccattcgagctgaacaagtgc
agcaagagcagattaagcatatgcaacaaaacagataatgatgttcaattctttgttgat
cctaaaaattaccccgagtggtacatccatgaaaaacggttgtgtggctttgtgcactca
catttcacttgtgctttccatgtggtaatgagagagcgaaagaaaaagccaccgcgggat
aatgatgagttcgaaatatatgtgaaacccatcaggcaccggcatcatcttgacatccag
cacaaaaaacatcttgagatgtatgatgatgagtcggacaagaccaataataatctggct
gcggatgaagccagggataaatatgtgactttgaagggtgtcgtcttgtttagggatccc
gaccctgcagcgaggcattggggtgaggtgaagttagatgatgagtactttggttaccta
acatcaatggatgttcatccgacggaggaatgggttctcatgggttatgaaggagggtat
atttgcatttggaggaaccttagccggaaggtagtggcgggctccaaggaggcccaccct
gagggagcacacgattatagattcatcgtagaggaatgtcatcagaaagggtgtggacct
tgtcgctcggttaagtttattgcctctatgcaatgggttgtatcaggtcatagtaacggg
gtgatccttgtgcacacatataatgatggcgaaccgaaacaagtcgagagagtcgaagcg
cacgagggtgcagttacatctttggcggtccacccaagtcagccacttgtactgtcgtca
tctgacgatggcacaatcagactatggaactggagtgaggactggtcatgtactcgcgaa
ttcagaaggcagaagggcactgtgcttcaggtggccttcaaccccagggacgccagcact
tttgccactgtcaccactttacctaggactgtgaagacctggagcatcgattctgacgat
cctgtcaagatctggaaaatgaaagtagagtctattgcgtatttcacaagtaacaatatt
gggtgttacatggctattagcatgcaggaaggacgaacaaagatcttggatatggagtca
atgacgtatgttcacacgcttcaaatcttggatgtgaggtcagagacatcatcactgctg
gtgcctccgagggacactgccatcacggctgttgcttgccaccccaagtatcccataata
attacaggcacaagtgaggggaatgttttcatttggaactacagcacgtacaggcttaag
gagtcactttggtttggagaagataaggttgaaggttttggattcatggagatagaaggg
agctttacaaggctcctgatcagatacgccgacaggatagaaatggtggatgttgagtgg
tcgagataa
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integrated database retrieval system
