Panicum virgatum (switchgrass): 120669939
Help
Entry
120669939 CDS
T07260
Name
(RefSeq) 4-hydroxy-tetrahydrodipicolinate synthase 1, chloroplastic-like
KO
K01714
4-hydroxy-tetrahydrodipicolinate synthase [EC:
4.3.3.7
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00261
Monobactam biosynthesis
pvir00300
Lysine biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
120669939
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
120669939
Enzymes [BR:
pvir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.7 4-hydroxy-tetrahydrodipicolinate synthase
120669939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHDPS
Motif
Other DBs
NCBI-GeneID:
120669939
NCBI-ProteinID:
XP_039805791
LinkDB
All DBs
Position
4N:complement(27184385..27202077)
Genome browser
AA seq
367 aa
AA seq
DB search
MAHQMLLGTLRTNVLINPTCVTGGRAALPRSSARICRRKFAVAAISGDYLPMRSTEAKNR
TSKSDIRSLRLMTAVKTPYLPDGRFDLEAYDYLINMQIEGGAEGVIVGGTTGEGHLMSWD
EHIMLIGHTVNCFGTRIKVIGNTGSNSTGEAVHATEQGFAVGMHAALHINPYYGKTSTEG
MIAHFKAVLPMGPTIIYNAPSRTGQDIPPPVIEALSSHPNIAGVKECVGHERVKCYTDKG
ISVWSGNDDECHDSRWKYGAIGVISVTSNLVPGLMHSLMHEGENVTLNEKLLPLIKWLFC
EPNPIPLDTALAQLGVARPVLRLPYKALPIEKRVEFVRIVDAIGREHFIGNREARVLDDE
DFISICR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggctcaccagatgctcctcggtaccctgcgcaccaacgtgctcatcaatcccacctgc
gtcaccggcggccgcgcagcgttaccaaggtcgtccgcaagaatatgcagacggaaattt
gcagtcgcagccatctcaggcgattatctcccgatgcgaagtactgaagcgaaaaatcgg
acatcaaaaagtgacatcagaagcctcagactaatgacagcagtcaaaacaccttattta
ccagatgggagatttgatctcgaagcgtatgattatttgatcaatatgcagatagagggt
ggtgctgaaggtgtaatagttggaggaacaacaggagagggtcaccttatgagctgggat
gagcacatcatgctcattgggcatactgtcaattgcttcggcactagaattaaagtgata
gggaacacaggaagtaactcaactggagaggccgttcatgcgaccgagcagggatttgcc
gtcggcatgcatgcagctcttcacatcaatccttactatgggaagacttcaactgaagga
atgatcgctcatttcaaggctgtcctcccaatgggtccaaccatcatttacaatgctcca
tcaaggactggacaggatatcccccctccagtcattgaggcactttcaagtcatccaaac
attgcaggtgtgaaagaatgtgtcggacatgagagggtcaagtgctacacagacaaaggt
atttcagtatggagtggcaatgatgatgaatgccatgattcaaggtggaaatatggtgcc
attggagttatctctgtgactagcaaccttgttcctggtctcatgcacagtctcatgcat
gaaggggagaacgtgaccctaaatgagaaactgttgcctctgataaaatggttattttgc
gaaccaaatccaattcctctggacactgctctggctcagctcggggttgcaaggcctgtt
ttgagattgccatacaaggctcttcctattgagaagagggttgagtttgtccggattgtt
gatgctattggacgggaacactttattggaaatagagaggcaagggttcttgatgacgaa
gatttcatctcgatctgtcggtaa
DBGET
integrated database retrieval system
