Panicum virgatum (switchgrass): 120669942
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Entry
120669942 CDS
T07260
Name
(RefSeq) translation initiation factor eIF-2B subunit gamma-like
KO
K03241
translation initiation factor eIF-2B subunit gamma
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120669942
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-2B
120669942
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LbH_EIF2B
Hexapep
NTP_transferase
NTP_transf_3
Hexapep_GlmU
GMPPB_C
Fucose_pyrophosphorylase
IspD
DUF4954
Motif
Other DBs
NCBI-GeneID:
120669942
NCBI-ProteinID:
XP_039805796
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Position
4N:27222159..27232487
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AA seq
452 aa
AA seq
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MDFQVVVLAGGTSETLSPLVSKDVPKALLPVANRPLLSYALDLLEASDLKDLIVVVEGQE
AARLVGAWVSSAYLDRLRVEVVAVSEDLGSAGALRAISKRLTANDILVISGDLVTDVLPG
AVAATHRRNGAAVTALLCSVPVSGPSETASSSGKDKAKKPNRLNIVGLDKTKQFLLHIVS
GTDVEKDVRVDKRKIQAVGQMEIRSDLMDAHLYAFKRTILQDVVEQKEAYRSIRLEVLPY
LVRSQLRSAPSGGIGTTVGETGNNAVFSSGNLQCLSQHRVIAPSAFKQDVLSRSHGGHRC
CAYIATKSKYCHRLNSIQSYCDINRDVTGEASHLSGYSFSAQNNIIHPSSVLGSKTTIGP
HCILAEGSQLGDKCSVKRSVIGRHCRIGSNVKIVNSVVMNHVVIEDGCHIQGSVVCNNVQ
LQERSVLKDCQIGAGYIVTAGSEHKAESLARK
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggacttccaggttgtcgtcctcgccggcggcacctccgagacgctctcgcccctcgtc
tccaaggatgtccccaaggcgctgctcccggtcgcgaaccgccccttgctctcctacgct
ctggacctcctcgaggccagcgacctcaaggaccttatcgtggtggtggaggggcaggag
gcggcgcggctcgtcggtgcctgggtctccagtgcatacctggatcgacttcgtgtggag
gtagttgctgtttctgaagatcttggaagtgctggtgcattacgagctatttcaaagcga
ctgacagcaaatgatattttggtaattagcggtgacctggtaacagatgtgttgcctggg
gctgttgctgctacacatagaagaaatggtgcagctgttactgctttactatgttctgtt
cctgttagtggtccttcagaaactgcttcttctagtgggaaagataaagctaagaagcca
aatcgtctgaacatagttgggctggacaagactaaacagttcttgttgcatatcgtatca
ggaactgatgttgaaaaagatgttcgagttgataagagaaaaatccaggctgtaggtcag
atggaaattcgaagtgacctgatggatgcacatctttatgcttttaagagaacaatatta
caggacgtagtggaacagaaggaagcataccgtagcattagacttgaagtcctcccgtat
ctagtgagaagtcaattgagatcagctccatcaggtggcattggaacaacagttggtgaa
actgggaataatgctgttttctccagtggtaatttgcagtgtttatcacagcatcgtgtc
attgcaccatctgctttcaagcaagatgtactgtcaagatcacatggtggacataggtgc
tgtgcttatattgctactaaaagcaaatactgtcaccgcttgaactcgattcagtcatac
tgtgatatcaatcgagatgttacaggggaagctagccatctgtctggttattctttctct
gcacaaaacaatatcatccacccatcctctgttcttggatcaaagactacaatagggcca
cattgtattcttgctgagggttcgcagctaggtgacaagtgtagtgttaagagatctgtg
attggtcgtcattgccgaattggttccaatgtaaagattgtcaactctgttgtgatgaac
cacgttgttattgaagacggctgccacatccaaggttctgttgtatgtaataatgttcaa
ctgcaagaacggtctgttctgaaagattgccagattggagctggctatatcgtgactgct
ggcagcgagcacaaagcagaatccctagcaagaaagtag
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