Panicum virgatum (switchgrass): 120669971
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Entry
120669971 CDS
T07260
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1-like
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120669971
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
120669971
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120669971
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
120669971
NCBI-ProteinID:
XP_039805841
LinkDB
All DBs
Position
4N:21118980..21123139
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AA seq
510 aa
AA seq
DB search
MRWKVAPGGKAAAAGAGEKLRFPASSAAARSRMKLWVVRATTTVLLWTCVVQLTAVGDTW
GPRVLKGWPSCLTAPEEEAAAAALSGAAAARPQPVVEKAVLPPKRIYRNNGYLMVSCNGG
LNQMRAAICDMVVIARYLNVTLVVPELDKTSFWNDPSEFQDIFDVEHFITSLRGEVRILR
ELPPRVKRRVELGMFHSMPPISWSDISYYQNQILPLIRKYKVLHLNRTDARLANNGLPIE
IQKLRCRVNYASLRFTPQIEELGKRVIRILRQNGPFLVLHLRYEMDMLAFSGCTQGCSNE
EAEELTRMRYAYPWWKEKVIDSDLKRKDGLCPLTPEETALVLRALDIDRSMQIYIAAGEI
YGGKRRMAALTSAYPNVVRKETLLEPSDLMFFQNHSSQMAALDYLVSLESDIFVPTYDGN
MAKVVEGHRRFMGFKKTVLLDRKLIVELVDRYTNGSLQWDVFSSLIKAAHAKRMGSASKR
TVIPDRPKEEDYFYANPQECFQDRDLLQTS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgaggtggaaggtggcgccagggggtaaggcggcggcggcgggcgccggcgagaagctc
aggttccctgcctcctccgccgccgcgcgctcgcggatgaagctctgggtcgtgcgcgcc
accaccacggtgctgctctggacctgcgtcgtccagctcaccgccgtcggcgacacctgg
ggcccgcgggtgctcaagggctggccgtcctgcctcaccgcgcccgaagaggaggccgcc
gcagccgcgctctccggcgccgccgccgcgcgcccgcagcccgtcgtcgagaaggctgtg
ctgccgcccaagagaatatatagaaacaatggttatttgatggtttcatgcaatggtggg
cttaaccagatgcgagctgcaatatgtgacatggttgtaattgcaaggtatttgaatgtc
actttagttgtgccagagttggacaagacttcattttggaatgatccaagtgagttccaa
gatatatttgatgtcgagcactttataacctcattacgaggtgaagttcgcattctgaga
gaattgcccccaagggtaaagagaagggttgaacttggaatgtttcactccatgccaccg
attagttggtctgatatttcctactaccaaaatcagattcttcctttgattcgtaaatac
aaagttctccatctgaatagaactgatgcaaggcttgcaaacaatggtttaccaattgag
attcagaaactacgatgccgggtaaattatgcctccctaagatttaccccacaaattgaa
gaattgggcaagcgagtaattagaatacttcgccaaaatggccctttcttggtccttcat
ttacgttatgaaatggatatgctggcattctctggctgtacacaaggttgcagtaatgaa
gaggcagaagagctcacaagaatgaggtatgcttatccatggtggaaagagaaagtgatt
gactcagacttgaaaagaaaagatgggctttgcccattgacaccggaggagactgctctt
gtcctccgagcattggatatcgatagaagtatgcaaatatacattgctgctggagaaata
tatggtggaaagcgcaggatggctgctctaacttcagcctacccgaatgtggtgaggaag
gagacacttttggaaccttctgatctgatgttcttccagaaccattcatcacaaatggca
gcactggattatttggtatctttagaaagtgacatatttgttccaacatatgatggcaat
atggctaaagtcgttgagggtcatcggagattcatgggtttcaagaagacagtcttatta
gaccgaaaacttattgtggagctagtagaccggtacaccaatggttctctgcaatgggat
gtgttctcttcattgatcaaggctgcccatgcaaagcggatgggatcagcttcaaagagg
acggtgattcccgacagacccaaggaagaggactacttctatgccaatccccaagaatgc
ttccaagatcgtgatcttctacaaacatcatga
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