Panicum virgatum (switchgrass): 120670015
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Entry
120670015 CDS
T07260
Name
(RefSeq) dehydrodolichyl diphosphate synthase CPT3-like
KO
K11778
ditrans,polycis-polyprenyl diphosphate synthase [EC:
2.5.1.87
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00900
Terpenoid backbone biosynthesis
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120670015
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvir01006
]
120670015
Enzymes [BR:
pvir01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.87 ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific]
120670015
Prenyltransferases [BR:
pvir01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120670015
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prenyltransf
Motif
Other DBs
NCBI-GeneID:
120670015
NCBI-ProteinID:
XP_039805900
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All DBs
Position
4N:5191204..5198064
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AA seq
303 aa
AA seq
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MAGSLIACSPEVDPKIEKPDEMVNAGVLASLQKFLRKCLIAVISYGPMPKHIAFIMDGNR
RYATFRSIQQGAGHRVGFSALIANLLYCYEMGVRYITVYAFSIDNFKRDPSEVQSLMQLM
EEKINELLDSRSVINRINCKINFWGNLDLLAEPVRLAAQKLMASTAANTGLVLSVCMPYN
STSEIVNAANEVCAERREMLQREHASDSNGQAANNSVHSEISVADLDRHMYSAGCPDPDI
VIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFRHLVWAILKYQRAYPYLAQNKNVAK
KQL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcagggtcacttattgcttgctctcctgaagtggatccgaagatagagaagcctgat
gagatggttaatgctggtgttcttgcaagtcttcagaaattcctacgcaagtgcctcata
gctgtcatctcatatggcccaatgcccaagcacatagcctttattatggacggtaaccgc
agatatgctacattcagaagcatccagcaaggagctggtcacagggtgggtttctctgct
cttattgcaaatctgctgtactgctatgaaatgggtgtgaggtacatcacggtgtatgca
tttagcattgacaattttaaaagggacccaagtgaggtgcagtccttgatgcagttaatg
gaggaaaaaatcaatgagttattagacagccggagtgtgatcaacaggattaactgcaag
atcaacttctggggaaatttggacctgttagctgagccagtgaggttagcagctcagaag
ctgatggcaagcacggctgcaaacacaggtttagttctctctgtctgcatgccatataac
tcgacttctgagattgtcaatgctgctaatgaggtctgcgcagaaaggagggagatgctg
cagagagaacatgccagcgactctaatggtcaggctgcaaataacagtgtgcattcagag
atttcagtggccgatttggatcgccatatgtatagcgctggttgcccggatcctgacatt
gtgattcggacttcaggtgagactcggctgagcaatttcctcctgtggcagacgacgttc
agtcatctgcagaacccagaccccctctggcctgaattctcgttcaggcatcttgtttgg
gctatattaaagtaccaaagagcctacccttatctggcgcagaacaaaaatgtggcaaag
aagcaactctga
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