Panicum virgatum (switchgrass): 120670016
Help
Entry
120670016 CDS
T07260
Name
(RefSeq) proteasome subunit alpha type-4-2
KO
K02728
20S proteasome subunit alpha 3 [EC:
3.4.25.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120670016
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120670016
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120670016
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
120670016
Peptidases and inhibitors [BR:
pvir01002
]
Threonine peptidases
Family T1: proteasome family
120670016
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
120670016
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
DUF3842
Motif
Other DBs
NCBI-GeneID:
120670016
NCBI-ProteinID:
XP_039805905
LinkDB
All DBs
Position
4N:complement(5216748..5217814)
Genome browser
AA seq
250 aa
AA seq
DB search
MSRRYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGILAADGVVLVGEKKVTSKLLQTSR
SAEKMYKIDSHLACAVAGIMSDANILINTARLHAQRYALAYQEPIPVEQLVQSLCDTKQG
YTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYGGWKAAAVGANSQAAQSMLKQDYK
DGLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEALGKLLAK
SGLTQPAPEA
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccgctatgacagccgcacgacgatcttctcgccggaggggcgtctctaccag
gtggagtacgcgatggaggcgatcggcaacgccgggtcggccctcgggatcctggcggcc
gacggcgtggtcctcgtcggcgagaagaaggtgacctccaagctcctccagacctcccga
tccgccgagaagatgtacaagatcgactcccacctcgcctgcgccgtcgccgggatcatg
tccgatgccaacatcctcatcaacaccgcccgcctccacgcccagcgctacgcgctcgcc
taccaggagcccatccccgtcgagcagctcgtccagtccctctgcgacaccaagcagggc
tacacccagttcggaggcctccgccccttcggggtctccttcctcttcgccgggtgggac
aagcaccacggcttccagctctacatgagcgatccatctggcaactacggcgggtggaag
gccgctgctgttggggctaacagccaggccgcgcagtccatgctcaagcaggactacaag
gacggcttgacccgcgaggaggccgtcgccctcgcgctcaaggtcctcagcaagaccatg
gattccaccagcttgaccgccgagaagctggagctggccgaggtgttcctgcagcccggc
accggggaggtgcagtaccaggtgtgctcccctgaggcgctggggaagctgcttgccaag
tccggcctcacgcagccagcacctgaggcttaa
DBGET
integrated database retrieval system
