Panicum virgatum (switchgrass): 120670045
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Entry
120670045 CDS
T07260
Name
(RefSeq) origin of replication complex subunit 1-like
KO
K02603
origin recognition complex subunit 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvir03032
]
120670045
03036 Chromosome and associated proteins [BR:
pvir03036
]
120670045
DNA replication proteins [BR:
pvir03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
120670045
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120670045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
BAH
AAA_lid_10
AAA_16
PHD
Cdc6-ORC-like_ATPase_lid
AAA_22
Cdc6_C
NPHP3_N
Cdc6_lid
SLFN-g3_helicase
PHD-1st_NSD
AAA_19
AAA_11
TIP49
Zot
NACHT
Motif
Other DBs
NCBI-GeneID:
120670045
NCBI-ProteinID:
XP_039805957
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Position
4N:7004584..7011782
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AA seq
802 aa
AA seq
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MDLSASPSKSKLRSSLAKPIAASTEPQMDLCTPCRPTPKRKSKSATTPAPVSPANPSTIR
RSRRLLETPTKAAPEVPVKATPTPVARGKRAAPSPKTPAQREPKRQRRQPRKRAYYRKVV
YDGGEFEVGDDVYVKRREDAESDAEDPEEECRVCFRAGGGVMVECDECLGGFHLRCVRPP
LRRVPEGDWACPYCEAERAGKAVERPRPPKGKRIVRTAKEKLLSSDLWAARIESLWREPD
GTFRAKVRWYIIPEETAAGRQPHNLRRELYHTNDLGDIEMETILRHCSVMCPKDFRDAND
GGDDVFYCEYEYDIHWHNFKRLADIDDEPETREDPNDEPYIAGNDYNSDTDEDSEYDEEE
EPKSCFSARRNQSHELAANSRKGRTYGLQKIGIRKIPEHVRCHQKTELEKAKATLLLATL
PKSLPCRDKEMEEISTFVKDAICNDQCLGRCLYIHGVPGTGKTMSVLAVMRRLRSEFNSG
TLNPYCFIEINGLKLASPENIYKVIYEQLSGHRVGWKKALHYLTEHFSGVSKIGKQANQP
IILLIDELDLLLTRNQSVLYNILDWPTKPNSNLVVIGIANTMDLPEKLLPRISSRMGIQR
LCFGPYNFRQLQEIITSRLKGIDAFEEQAIEFASRKVAAMSGDARRALEICRRAAEFADY
RIKQSGQTSANKGDGVVCMRDIEAAIQEVFQAPHIQVMKNCPKFGKVILVAMVHELYKSG
LGEVTFDKLATTVLSWCHANREFLPGYDTLMKICCKFGESKIILCEEGSKHKLQKVQLNY
PSDDVTFALKESPDLPWLSKYL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggatctctccgccagcccctccaaatccaagctcagatcctcgctggcgaagccaatc
gccgcctccaccgagcctcagatggacctctgcactccgtgcaggcccacgcccaagcgg
aagtccaaatcggcgaccacgccggcgccggtgtccccggcgaacccatccaccatccga
cgctcccgccgcctcctcgaaactcccacgaaggcagctccagaggtgcccgtgaaggct
acgccgacccccgtcgccaggggcaagcgcgccgcgccgtcgcccaaaacccctgcccag
cgcgagcccaagcggcagcggcggcagccgagaaagagagcgtactaccggaaggtggtg
tacgacggcggggagttcgaggtcggggacgacgtgtacgtgaagcgtcgggaggatgcg
gagtcggacgcggaggacccagaggaggagtgccgcgtgtgcttccgcgccggaggcggg
gtgatggtggaatgcgacgaatgcctcggcgggttccacctgcggtgcgtgcgcccgccg
ctgcgccgagtgcccgaaggggattgggcgtgcccgtactgcgaggctgagcgcgctggc
aaggcagtcgagcggcccaggcctcctaaggggaagcgcatcgtgagaactgccaaggag
aaactcctctccagtgatttgtgggctgcgcgcatcgagagtttatggagggagccagat
ggcacattccgggcgaaggtaaggtggtacattatccctgaagagactgcagcaggaagg
cagccacataatttgcggagagaactgtaccataccaatgatcttggtgacattgagatg
gaaacaatccttagacattgttctgtaatgtgccccaaagacttcagggatgccaacgat
ggaggggatgatgtattttattgtgaatatgagtatgatatacactggcataattttaag
cgtttggctgacattgacgatgagcctgagacaagggaagatcccaatgatgagccttac
attgctggtaacgattataacagtgatacagatgaagattcagaatatgatgaggaggaa
gaacctaaatcatgtttctctgccagaaggaatcaatcacatgagttggcggcgaattca
aggaagggtaggacatatggcctacaaaaaattgggatacgtaaaattcctgagcatgtt
cggtgccaccaaaagactgagctggagaaggcgaaagcaaccctgttactggcaactctt
cctaagtcattgccttgcagggataaagaaatggaggagatatctacatttgtgaaggat
gcaatttgtaatgaccaatgtctaggacgctgcctttatatccatggtgtacctggtact
ggcaagacaatgagtgtacttgctgttatgaggaggctgagatctgaatttaattccgga
actctgaatccatattgttttatagaaattaatggccttaaattagcttctcctgagaat
atctacaaggttatatatgaacagttgagtgggcatagggttgggtggaaaaaggctctt
cactatttaacagagcatttttcaggtgtttcgaaaattggaaagcaagcaaaccagcca
attattttactcattgatgagcttgatcttcttttgacaagaaaccagtcggttctctat
aacattcttgattggcccaccaaaccaaattccaacctagttgttataggtatagcaaac
acaatggatctccctgaaaagttattgcctcgtatatctagtcggatgggtatccaacga
ctgtgttttggcccatacaattttcggcagttgcaggaaattataactagtcgtctgaag
ggtattgatgcctttgaggaacaggctattgaatttgcttctagaaaggtagctgccatg
tcaggtgatgctaggcgagctttagaaatttgcagacgggcagcagagttcgcagactac
cgtatcaaacagtctggacagacttctgcaaataaaggagatggtgttgtttgcatgcgt
gatatagaagctgctattcaggaagtctttcaggcaccacatattcaagtgatgaagaac
tgcccaaagtttggaaaagttattttggttgctatggtccatgaattgtacaaaagtgga
ctaggtgaagtaacttttgataagttagcaacaacagttctctcctggtgccacgctaat
agagaattcttgcctggatatgacactctcatgaaaatctgctgcaagtttggtgaaagc
aagatcatcctctgtgaagaaggtagtaagcacaagttgcagaaggtgcagctaaactac
ccaagtgatgatgtaacctttgccctcaaggaatcccccgatcttccttggttgtccaag
tacttgtga
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