Panicum virgatum (switchgrass): 120670074
Help
Entry
120670074 CDS
T07260
Name
(RefSeq) probable auxin efflux carrier component 1c
KO
K13947
auxin efflux carrier family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120670074
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120670074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mem_trans
Motif
Other DBs
NCBI-GeneID:
120670074
NCBI-ProteinID:
XP_039805998
LinkDB
All DBs
Position
4N:complement(11547044..11550261)
Genome browser
AA seq
597 aa
AA seq
DB search
MITGTDFYHVMTAMVPLYVAMVLAYGSVRWWRIFTPDQCSGINRFVALFAVPLLSFHFIS
TNNPYTMNLRFIAADTLQKLIVLALLTAWSYFSHRGCLEWTITLFSLSTLPNTLVMGIPL
LKGMYGDFSGSLMVQIVVLQCIIWYTLMLFMFEYRGARILITEQFPDTAGAIASIVVDPD
VVSLDGRNDAIETEAEVKEDGKIHVTVRRSNASRSDIYSRRSMGFSGTTPRPSNLTNAEI
YSLQSSRNPTPRGSSFNHTDFYSMVGRSSNFAAGDAFGVRTGATPRPSNYEEDAPGKPNK
YGQYPAPNPAMAAPAKGPKKAANGQAKGEDGKDLHMFVWSSSASPVSDVFGNGNAEYNDA
AAVKEVRMAVASPRKVAADGRKERSEDFAERDDFSFGNRGGAERDAEAGDEKAAVAGQGG
NAGAGAPAAMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWSLVCFRWNFEMPAIILK
SISILSDAGLGMAMFSLGLFMALQPRIIACGNKVATFAMAVRFLTGPAVMAAASFAVGLR
GTLLHVAIVQAALPQGIVPFVFAKEYGVHPDILSTAVIFGMLIALPITLVYYILLGL
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccggcaccgacttctaccacgtgatgacggccatggtgccgctctacgtcgcc
atggtcctggcgtacggctccgtccggtggtggcgcatcttcaccccggaccagtgctcc
gggatcaaccgcttcgtggcgctcttcgcggtgccgctgctctccttccacttcatctcc
accaacaacccctacaccatgaacctccgcttcatcgccgccgacacgctccagaagctc
atcgtcctcgcgctgctcaccgcctggagctacttctcccaccggggctgcctcgagtgg
accatcacgctcttctccctctccacgctgcccaacacgctggtcatgggcatcccgctg
ctcaagggcatgtacggcgacttctccggcagcctcatggtgcagatcgtcgtgctccag
tgcatcatctggtacacgctcatgctcttcatgttcgagtaccgcggcgccaggatcctc
atcaccgagcagttccccgacaccgccggcgccatcgcctccatcgtcgtcgaccccgac
gtcgtctcgctcgacggccggaacgacgccatcgagacggaggccgaggtcaaggaggac
ggcaagattcacgtcaccgtgcgccgctccaacgcctcgcgctccgacatctactcgcgc
cgctccatgggcttctccggcaccacgccgcgccccagcaacctgaccaacgccgagatc
tactcgctgcagtcgtcgcggaaccccacgccgcggggctccagcttcaaccacaccgac
ttctactccatggtcggccgcagctccaacttcgccgccggggacgccttcggggtgcgc
accggcgccacgcccaggccgtccaactacgaggaggacgcgccggggaagcccaacaag
tacggccagtacccggcgcccaacccggccatggcggcgccggccaaggggcccaagaag
gcggccaacgggcaggccaagggcgaggacggcaaggacctgcacatgttcgtctggagc
tccagcgcgtcgcccgtctccgacgtgttcggcaacggcaacgccgagtacaacgacgcc
gccgccgtcaaggaggtccgcatggccgttgcctccccgcggaaagttgcggcggacggg
aggaaggagaggagcgaggacttcgcggagcgcgacgacttcagcttcgggaaccggggc
ggagcggagagggacgcggaggccggcgacgagaaggcggcggtggccgggcaggggggg
aatgccggcgcgggggcgcccgcggcgatgccgccgacgagcgtgatgacgcggctcatc
ctcatcatggtgtggcgcaagctgatccgcaaccccaacacctactccagcctcatcggc
ctcatctggtcgctcgtctgcttccggtggaacttcgagatgccggcgatcatcctcaag
tccatctcgatcctctccgacgccggcctcggcatggccatgttcagcctcgggctgttc
atggcgctgcagccgcggatcatcgcgtgcgggaacaaggtggcaacgttcgccatggcc
gtgcggttcctgaccggcccggccgtcatggccgccgcctccttcgccgtcggcctccgc
ggcacgctcctccacgtcgccatcgtccaggcagcgctgccgcagggaattgtccccttc
gtcttcgccaaagagtacggcgtgcaccctgacatcctcagcacggcggtcatcttcggc
atgctcatcgcgctgcccatcacgctcgtctactacatcctgctggggctgtga
DBGET
integrated database retrieval system
