KEGG   Panicum virgatum (switchgrass): 120670105
Entry
120670105         CDS       T07260                                 
Name
(RefSeq) vesicle-associated membrane protein 711-like
  KO
K08515  vesicle-associated membrane protein 7
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
pvir04142  Lysosome biogenesis
pvir04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120670105
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    120670105
   04142 Lysosome biogenesis
    120670105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120670105
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120670105
Membrane trafficking [BR:pvir04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    120670105
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120670105
SSDB
Motif
Pfam: Synaptobrevin Longin
Other DBs
NCBI-GeneID: 120670105
NCBI-ProteinID: XP_039806032
LinkDB
Position
4N:complement(5616347..5621035)
AA seq 221 aa
MAILYALVARGTVVLAEHSAAATNAGAVARQVLERLPGGGADSHVSFTQDRYVFHAKRTD
GITALCMADDAVGRQIPFAFLEDIHGRFVKTYGRAALTALAYAMNDEFSRVLSQQMDYYS
NDPNADRINRMRGEINQVRSVMIDNIDKVLERGDRLELLVDKTANMQGNTVRFKRQARRF
RNTVWWRNVKLTAALILLLLVIVYVALVFVCHGFTLPTCIR
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcgatcctgtacgcgctggtggcgcgcggcacggtggtgctggcggagcacagcgcc
gcggccaccaacgcgggcgccgtcgcgcgccaggtcctcgagcgcctccccggcggcggc
gccgacagccacgtctccttcacgcaggaccgctacgtcttccacgccaagcgcaccgac
ggcatcaccgcgctctgcatggccgacgacgccgtggggagacagataccttttgcattt
ttggaagacattcatggaagattcgtcaagacatatggccgtgctgcactgacagctctt
gcgtatgcaatgaatgatgaattctcaagggtccttagccaacaaatggactactattca
aatgaccctaatgcagatagaataaaccgcatgagaggagaaatcaatcaggttcgtagt
gttatgattgacaacattgacaaggtccttgaaagaggtgatcgtttggagctgctggtt
gacaagaccgctaatatgcaaggaaatactgttcgattcaaaagacaagctcggcgcttc
agaaacactgtttggtggagaaatgtcaaactcacggctgcgttgatacttctccttctg
gtaatagtatatgtcgcgcttgtcttcgtgtgccatggtttcaccttaccaacttgtata
cgctag

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