Panicum virgatum (switchgrass): 120670117
Help
Entry
120670117 CDS
T07260
Name
(RefSeq) putative E3 ubiquitin-protein ligase UBR7 isoform X1
KO
K11979
E3 ubiquitin-protein ligase UBR7 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120670117
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120670117
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
120670117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-UBR
PHD
PuR_N
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
120670117
NCBI-ProteinID:
XP_039806057
LinkDB
All DBs
Position
4N:30033521..30042044
Genome browser
AA seq
416 aa
AA seq
DB search
MADTARDGGDAFADEAEPTVTIGEYIEGIEAEELEADLVLGGDDGKECTYAGGYLKRQAV
FSCLTCVPDGVAGVCTACSLACHDGHEIVELWTKRRFRCDCGNSKFGGHLCKLCPEKDSE
NLENCYNHNFKGSYCTCGRPYPDPEAKEQVEMIQCCICEDWFHEDHIGLNSIEEIPRDEE
GEPLYEDFICHKCSPVCYFLKLYPETIWASGKQDLASQTDRNDSTVMEGGPSDHANIEKH
ENGALVDHMGGEKTSMENGSIKDIAVPEKANLGNSSGNNCKLGTDVNAMPADTDKNMPFF
MSKGWRNTLCRCETCTNFYTQRGIAYLVDKEDSIEEYEKIAKQKREKKLEQQEGAETNFL
NSLNHVQKIEILSGINDMKNEFQSFLESFDSSKPVTSEDIRSVFENLAKKKKQRLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggccgacacggcgcgcgacggcggggacgccttcgcggacgaggcggagcccacggtc
accatcggcgagtacatcgagggcatcgaggccgaggagctggaggcggatttggtgctg
ggcggcgacgacggcaaggagtgcacctacgccggcgggtacctcaagcgccaggccgtg
ttctcctgcctcacctgcgtgccggatggagtcgccggggtgtgcaccgcctgcagcctc
gcctgccacgacggacatgagattgttgaactttggacaaagagaaggtttcgttgtgac
tgtggcaactcaaagtttggtggccacctctgcaagctctgccctgagaaagattctgag
aatttagaaaattgttataaccataactttaaaggttcctattgcacatgtggaaggcct
tatccagatccagaagctaaggagcaagttgaaatgatacaatgctgtatttgtgaggac
tggtttcatgaggatcatattggtcttaactctattgaagagataccgcgagatgaagaa
ggggaaccactctatgaagatttcatatgccataaatgctcaccagtttgttatttcttg
aagttgtatcctgaaacaatttgggcttctggtaagcaggatttggcatcacaaactgac
agaaatgattcaactgtgatggaaggaggaccttcggatcatgctaacattgagaaacat
gaaaatggtgctcttgttgatcatatgggtggtgagaagacctccatggaaaatggttct
ataaaagatattgctgttcctgagaaggccaatttggggaacagttctggaaacaactgc
aagctaggaacagatgtaaatgcaatgccagctgacacagacaaaaatatgccctttttc
atgtctaaaggctggaggaacacactatgtaggtgcgaaacatgcactaacttctatact
caacgaggtattgcatatcttgttgacaaggaggactctattgaggagtatgagaagatt
gccaagcagaagagggagaagaagttggaacagcaggaaggagctgagacaaactttcta
aattcgcttaaccatgttcagaagatagagatcttgagtggcattaatgacatgaagaat
gagtttcagtcctttctggaatcttttgactcgtcaaaaccagtcacatcagaagatatt
cgctccgttttcgagaatctggctaagaagaagaaacagaggttatcttag
DBGET
integrated database retrieval system
