Panicum virgatum (switchgrass): 120670204
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Entry
120670204 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 9
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120670204
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120670204
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120670204
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120670204
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
NDUF_C2
DUF2470
Motif
Other DBs
NCBI-GeneID:
120670204
NCBI-ProteinID:
XP_039806202
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Position
4N:11831395..11834490
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AA seq
501 aa
AA seq
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MAGGRAFRPSAPRRAAFAALLTLLLLAALSFLLSSAPASSARSSPPPSARLAAVRRHAAD
HAAVLAAYAAHARKLKEASAAQSLSFSSLSSDLSALSARLASHLSSSLPEDALRPLEKEA
RERIKFARALAADAKERFDTQSKIQKLSDTVFAVGEQLARARRGGRMSSRIAARSTPKSL
HCLAMRLLEARLTNPSAFADDPEPSPEFDDPALYHYAVFSDNVLAVSVVVASVARAAADP
SRHVFHVVTAPMYLPAFRVWFSRRPPPLGVHVQLLAYSDFPFLNTTNSPVIRQIEGANRD
VALLDYLRFYLPDMFPALRRVVLLEDDVVVQKDLAALWQVDLDGKVNGAVEMCFGGFRRY
RKYLNFTQPIVQDRFNPGACAWAYGVNVFDLEAWRRAGCTELFHQYMEMNEDGELWDPTS
VLTAGLMSFYGNTKPLDKSWHVMGLGYNPSISPEAIRNAAVIHFDGNMKPWLDVALNQYK
ALWTKYVDTEMEFLTLCNFGL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggccggcggccgcgcgttccggccgtccgcgccgcgccgcgcggccttcgcggcgctg
ctcacgctcctcctcctcgcggccctctccttcctcctctcctccgcgcccgcctcctcg
gcccgctcctcgcccccgccgtccgcgcgcctcgccgccgtccgccgccacgcggccgac
cacgcggcggtcctggccgcgtacgccgcgcacgcgcggaagctcaaggaggcgtccgcg
gcgcagtcgctgtcgttctcgtctctctcctccgacctctccgcgctctccgcccgcctc
gcctcccacctctcctcctccctccccgaggacgcgctcaggcccctcgagaaggaggcc
cgcgagcgcatcaagttcgcgcgcgccctcgccgccgacgccaaggagcgattcgacacc
cagtccaagatccagaagctctccgacacagtcttcgccgtcggcgagcagctcgcgcgc
gcgcgccgcggggggcgtatgtcctcccgcattgccgcgagatccacccccaagtcgctc
cactgcctcgccatgcgcctcctcgaggcccgcctcaccaacccgtccgctttcgccgac
gaccccgagccgtcccccgagttcgacgaccccgcgctgtaccactacgccgtcttctcc
gacaatgtgctcgccgtctccgtcgtggtggcctctgtcgcgcgcgccgcggccgacccc
tcgcgtcacgtctttcacgtggtcaccgcgcccatgtacctgcctgcattccgcgtctgg
ttttcgcgccgcccgccgccgctcggtgtgcacgtccagctccttgcctactccgacttc
ccgttcctcaacaccaccaactcgccggtgatcaggcagatcgagggcgctaacagggat
gtcgcgttgctggattacctgaggttctacctcccagatatgttccctgcactgcggagg
gtagtgcttttggaggacgatgtggtggtgcagaaggatttggcagcgctttggcaggtt
gacttggatgggaaggtgaatggtgccgtggagatgtgctttggcggattcaggaggtat
agaaagtatctcaacttcacccagcccattgtgcaggatcggttcaatcccggtgcctgt
gcatgggcatacggggtgaatgtgtttgatcttgaggcatggcggcgggctggctgcaca
gaactgttccatcagtacatggaaatgaatgaggatggcgagctgtgggatccaacatct
gttctaacagccggattgatgtcattctatggcaataccaagccattggataagtcatgg
catgtaatgggtcttggctataatccaagcatcagccctgaggcaatccgaaatgctgca
gtgatacacttcgatgggaacatgaagccctggcttgatgtcgctttgaaccaatacaag
gccctgtggacaaaatatgtcgacactgaaatggaattcctaaccctatgcaactttggt
ctatga
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