Panicum virgatum (switchgrass): 120670205
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Entry
120670205 CDS
T07260
Name
(RefSeq) indole-3-glycerol phosphate synthase, chloroplastic-like
KO
K01609
indole-3-glycerol phosphate synthase [EC:
4.1.1.48
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00400
Phenylalanine, tyrosine and tryptophan biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01230
Biosynthesis of amino acids
Module
pvir_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
120670205
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.48 indole-3-glycerol-phosphate synthase
120670205
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Motif
Pfam:
IGPS
Motif
Other DBs
NCBI-GeneID:
120670205
NCBI-ProteinID:
XP_039806203
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Position
4N:complement(2015198..2019444)
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AA seq
380 aa
AA seq
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MESALVSRSVGSSFAAAAPRGCLPRPSRVATFTGARARARPLRAGPPKDSILEALAKDDM
LNAEELVQWENGKSVNGIAASQGIRIRRHCRPTASLKEIEEEMGAPRNILEKIIWDKEIE
VAEGLAKNPLKEVMEAAVKAPPSRDFYGALEAAYKRNGVPALIAEVKKASPSRGVLRENF
NPVEIAKAYEKNGAACLSILTDEKYFQGSFENLEKVRTSGVKCPLICKEFVIDKWQIYNA
RSKGADAILLIAAVLTDLDIKYFLRICKELGMTALIEVHDEREMERVLNINGVKLIGINN
RSLETFVVDTANTKMLLEKHGDSIREKGILVVGESGLFTPDDVAYVQNAGVSAVLVGESL
VKQEDPGRAIAGLFGKELLH
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggagtccgccctcgtctcgcgatccgttgggtcctccttcgccgccgctgcccccagg
ggttgtttgccccggccctcgcgcgtcgccaccttcaccggcgcacgcgcccgcgcccgc
ccgctccgcgccggcccccccaaggactcaattcttgaagcgctggctaaggacgacatg
ctgaacgccgaggagctggtccaatgggagaacggcaagtcggtcaacggcattgcagct
agccaggggatccgcatccgcaggcactgccgccccactgcctccttgaaggagatagag
gaggagatgggggcgcctcgcaacatcctagagaagatcatctgggacaaggagatcgaa
gtggctgaggggcttgcgaagaaccctctgaaggaggtgatggaggctgcagtgaaggct
cctccttcaagagacttctatggcgctttagaagctgcctataagcgtaatggggtgcct
gcactgatcgctgaggtcaagaaagcatccccgagcaggggtgtgctcagggagaacttt
aatcctgttgaaattgctaaagcttatgagaagaatggggctgcatgtttgagcatcttg
accgatgagaagtactttcagggaagctttgagaatcttgagaaagtgcgcacctcagga
gtgaagtgccctcttatctgcaaagaatttgtcattgataagtggcaaatatataacgct
cgatcaaagggtgccgatgcaatcttgctgattgctgctgtgctaactgatctcgacata
aagtactttcttcggatatgcaaggagctgggaatgacagctcttattgaggttcatgat
gaaagagagatggagcgtgtgctgaatataaatggagttaagcttatcggcatcaataat
cgcagccttgagacatttgttgttgatactgcaaacaccaagatgttgctcgagaagcat
ggggatagcattagggagaagggaattttggttgtgggtgaatctgggctgtttaccccg
gatgatgttgcttatgtgcagaatgctggtgtctctgctgttttggtgggagaatccctg
gtgaagcaagaggaccctggacgagccatcgctgggctgtttgggaaagaattactgcat
tga
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