Panicum virgatum (switchgrass): 120670237
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Entry
120670237 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120670237
KO
K20523
SH3 domain-containing YSC84-like protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120670237
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
120670237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ysc84
FYVE
Motif
Other DBs
NCBI-GeneID:
120670237
NCBI-ProteinID:
XP_039806240
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All DBs
Position
4N:complement(31703770..31709553)
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AA seq
541 aa
AA seq
DB search
MAETARLYPPIEPYDLEPPQVPAGGGGGGGGEEKARASNGPAIWDEEPDASPAPEAAPHI
FEPGAKDHPSRNFKEGSLDVVNACEFRDEMTTSKESRENIYDSFPLCEQTGIWVPASVPP
MTKHDHEEWQKGFGYNSGCFPEEEYQWDIDEENLEMTMWDVLSEMIIAGKDKILSIASFD
IGKYGMSMVSDFFLEEALKDKPQTLEDISAGSEHALLETEPTKWLPDSAAPSCMLCGARF
HPIICTRHHCRFCGGIFCGGCSKGRSLMPPKFMTSDPQRVCDVCGVRLECIQPYLMNRFS
RACQLPTQDLTDLSTLRSWINIPWAIKMEYEIYKAANSIYGYCKVGDLKAEKSIPDSILR
EAKGLAIITEAKVGMMLTYKIGTGLVVARRADGSWSPPSAISTCGLGYGVQAGGELADYI
IVLRNTDAIKTFSGNAHMSIGAGISASAGHLGRAAEADFRAGDGGYAACYTYSCSKGAFV
GCALNGSVVSTRDSVNARFYGGPVKASEILLGSLPRPPAAATLYKALSILFDKIAKETTC
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaactgctcgcctctaccctcccatcgagccgtacgacttggagcccccgcag
gtgcctgctgggggcggcggcggcggcggcggcgaggagaaggctagggcttccaacggg
ccggcgatatgggacgaggagcccgacgcgtcgcccgcccctgaagcggccccccacata
tttgagccaggagcaaaggatcatccttcaagaaacttcaaggaaggaagccttgatgtt
gtcaatgcttgtgagttcagagatgagatgacaacctcgaaggaatctagagaaaacatc
tatgatagtttcccactttgtgagcaaacaggcatatgggtgcctgcttctgttccacca
atgacaaaacatgatcatgaggagtggcaaaaggggttcggttataatagtggatgcttc
ccagaagaagaatatcagtgggatattgatgaagaaaatttggagatgacaatgtgggat
gtgctttctgagatgatcattgcaggaaaagataaaatattatctattgcatcatttgat
attgggaagtatggcatgtctatggtttcagattttttccttgaggaggctttgaaggat
aagcctcaaacacttgaagatatcagtgctggttctgaacatgctctccttgagacagaa
ccaacaaagtggttgcctgatagtgctgccccttcttgcatgctttgtggagcacgtttt
catccgataatttgcactcgccatcactgccgattttgtggtgggatattttgtggtggc
tgttcaaagggtagaagcttgatgcccccgaaattcatgacttcagatcctcaaagggta
tgtgatgtttgtggagtgcgtcttgagtgtatccagccttatttaatgaatcggttcagt
cgtgcttgtcaacttccaactcaagacttgacagacctgagcaccttgaggtcatggata
aacatcccatgggcaatcaaaatggagtatgagatctacaaagctgcaaattccatctac
ggctactgtaaggtaggagatcttaaagctgagaaatcaatccctgattcaattctcaga
gaagcaaaagggcttgcaataatcactgaggcaaaggttggaatgatgcttacatacaaa
attggtactggactagtggttgctcgcagagctgatggttcttggtcccctccttctgcc
atctctacttgcggccttggatatggagttcaggctggaggcgagttagctgactacatt
attgttcttaggaacacagatgccatcaaaactttcagtggaaatgcacatatgtcaatt
ggggctggtattagtgcttctgctggtcatcttggacgagcagcagaggccgatttccgt
gctggtgatggtggttatgctgcatgttacacatatagttgtagcaaaggtgcctttgtg
ggctgcgcactgaatggaagtgtggtatccactcgagactccgtaaatgctcgattttat
ggcggcccagttaaggcatcagaaatccttcttggctcactgcccaggccacctgctgcc
gccactctctacaaagctttatccatattattcgataagatcgcaaaggaaaccacttgt
ctttag
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