KEGG   Panicum virgatum (switchgrass): 120670246
Entry
120670246         CDS       T07260                                 
Name
(RefSeq) brassinosteroid-responsive RING protein 1-like
  KO
K16281  RING-H2 zinc finger protein RHA1
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvir04121]
    120670246
Ubiquitin system [BR:pvir04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    120670246
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-rbx1 zf-RING_5 zf-C3HC4_3 zf-RING_16 zf_RING_Vps8_fungal zf-RING-like RINGv
Other DBs
NCBI-GeneID: 120670246
NCBI-ProteinID: XP_039806250
LinkDB
Position
4N:complement(648807..650147)
AA seq 137 aa
MLMGFPVGYSEVPKLLLHLLLLLGHLRRLSSCLLRLAGLHADRRHYYYYCHDDAAAAERL
DEHSPAVRFDSLPPPALPADDGCCVCLGDFHAAAEVRRARGCRHVFHRACLDRWAAHGHR
TCPLCRTPILPPLLLPS
NT seq 414 nt   +upstreamnt  +downstreamnt
atgctgatggggttccccgtcgggtactcggaggtgcccaagctgctcctccacctcctc
ctcctgctcggccacctgcgccgcctctcctcctgcctgctccgcctcgccggcctccac
gccgaccgccgccactactactactactgccacgacgacgccgccgcggcagagcgcctc
gatgagcactccccggcggtgcgcttcgactcgctgccgccgcccgcgctgccggcggac
gacggctgctgcgtgtgcctgggcgacttccacgccgccgccgaggtgcgccgcgcgcgg
gggtgccgccacgtcttccaccgcgcctgcctcgaccgctgggccgcgcacggccaccgc
acctgcccgctctgccggacgcccatcctgccgccgctgctcctgccgtcctag

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