Panicum virgatum (switchgrass): 120670283
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Entry
120670283 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1-like 2
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120670283
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120670283
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
120670283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
TolA_bind_tri
zf-RING_UBOX
BD-FAE
RING_XB3-XBAT31
zf-RING_6
DZR_2
Motif
Other DBs
NCBI-GeneID:
120670283
NCBI-ProteinID:
XP_039806336
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All DBs
Position
1K:complement(5939862..5950659)
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AA seq
843 aa
AA seq
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MDSAALQYENQKLFQQLEAQKSEMHALECKFKELRDEQCSYDKTLISLNKMWNQLIDDLV
LLGVRAGGDLGNLQALDHEELSEDSFESCPSEEIFLLRLLKSSNFKNNNENNLLEFVEEA
LAFRHSVTITLMKSLQEAICSHQARSESLALAFNGEKSNEDVIVALQNHNDHLKEVVENA
NQAISIINEKHKRYLDEIEASKSNHSRELQEIKRISGELEESMAELELSRRKLVVLQLQR
HGSVMDASDANAVNGGISTDKSSDKSMSWQDLKDAVDAAKTLAGNRLLELHQTQEDNLIL
SKELGDLEGQLKDENYILVSKPYIILNDQLQNLHAEIERCRGLVEVLQNDKDQLMQKEKE
ICAKAESFDSITQTIATYETKIKELENQIQIFISEKNDLETKVEETLQDSGKKDFKNEIH
VMAAALSNELGMMENQLSRSKDAASEALALREQAESLISLVAKKIEEHKEVSDKYNLQLT
EIKSLKALVEELEKEKQELQFIADMYAKECSESRTIADIEESENRARNQAEYLKSSLEEH
SLELRVKAATEAESACQQRLSFAEAELEELRAKVDASERDVVELKEAIRIKEAEGDAYIS
DIETIGQAYEDMQTQNQHLLEQLADREDFNIKLVSDSVKMKQASSSLLSDKLILEKQLQQ
VNTSLESSKLKMTRGEEQMKICVAQAIKTSAENRHLAISLERTALEVSNTEKELKWLRSS
VGSSEKEYDQTQEKISKLRNLLEHERSERRRLEEQYEEVKNEVMELTSETEETTIQKLQD
EIKECKAILKCGVCFDRPKEVVIIKCFHLFCSPCIQRNLEIRHRKCPGCGTPFGQNDVRE
VKI
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggattccgcagctcttcaatatgaaaaccaaaagttgtttcaacaattggaggcacag
aagtctgaaatgcatgccttggagtgcaagttcaaggagctgagagatgagcaatgttct
tatgacaagactttgatttcgctgaataaaatgtggaatcagctgattgatgatttggtc
ctgcttggggtacgggctggtggagatttgggcaatttgcaagcgcttgaccatgaagag
ttatcagaagattcttttgagtcatgtccttcggaggagatatttctcttgaggctcttg
aagtccagcaatttcaaaaataacaatgaaaataacttgttggaatttgttgaagaagct
cttgcttttcgccattcggtaactattactctgatgaagtccctgcaagaggcaatttgt
tcacatcaggctagaagtgaatctttagctttggcttttaatggagaaaagtcaaatgaa
gatgttattgttgcccttcaaaaccataacgatcatttgaaagaggttgttgagaatgcc
aatcaggctatttctattattaatgagaagcacaaaaggtatctggatgagattgaggct
tccaagagcaaccattcaagggagctacaggaaattaagcgcatttcaggtgagctagag
gaaagcatggcagagcttgagttaagtcgacggaagttggttgtgctccaattgcagagg
catggttctgtcatggatgcatccgacgcaaatgctgtgaatggtggcatttctactgat
aaatcttcagacaaaagtatgagctggcaagacctcaaagatgctgttgatgcagctaag
accctcgcaggaaaccgtctattagaactccatcaaacgcaagaggataacctaatacta
tccaaggaacttggagatctcgaggggcaattgaaagatgaaaattatattttagtatca
aaaccatacataattcttaacgatcagttacagaatctgcatgctgagatagagcgctgt
agggggttagtagaagttttacagaatgacaaggaccagctcatgcaaaaggagaaagaa
atttgtgcaaaagcagaatcattcgacagtattacacaaactattgccacttatgagaca
aaaattaaagaactggaaaatcaaattcagatattcatatctgaaaagaatgatctggag
accaaggttgaggaaactttgcaagattcaggcaagaaagacttcaagaatgagattcat
gttatggctgcagcactgtccaatgagctgggaatgatggagaatcagttgagtagatca
aaggatgcggcttctgaagcacttgcattacgtgagcaagcagaatcattaatatcactt
gtagctaagaagattgaggaacataaggaggtatctgataagtacaacttacaactaact
gagatcaagtccctcaaagcattggttgaggagttggagaaggaaaagcaggagctgcaa
tttattgcagatatgtacgcaaaagaatgttctgagtcaaggacgattgctgatattgaa
gaatcagaaaaccgagctcgcaatcaggctgagtatttgaagagcagtctggaggagcat
agtcttgagcttcgagtaaaagcagcaactgaagctgaatctgcatgccagcaaaggctt
tcctttgctgaagcagaactggaagagttaagggccaaagtagacgcatcagaaagagat
gttgtggaactcaaggaggcaataagaattaaagaggctgaaggagatgcctatatttct
gatattgagacaatcggtcaagcttatgaagacatgcaaacacaaaatcagcatcttctt
gaacagctcgcggatagagaggactttaacataaagctggtatcggatagtgtgaagatg
aaacaagcttctagctcccttctctctgacaaacttatattagagaagcaactccagcaa
gttaatacttcactggaatcatccaaactgaaaatgactcgtggtgaagagcagatgaag
atttgtgtagcacaagcgataaaaacttcagctgaaaacaggcatcttgcaattagcctg
gaaaggactgcgctggaggtatccaacactgagaaggaactcaagtggcttcggtcctct
gttggatcctctgagaaagaatatgaccagactcaggaaaagatatctaagctgaggaat
ttgctagagcatgagaggagcgagaggcggcgtcttgaggaacaatatgaagaggtgaaa
aatgaagttatggaactgacgtcggagactgaagagactactatccagaagctccaggat
gaaataaaagaatgcaaggctattctcaagtgtggtgtctgctttgaccggcctaaagag
gtcgtgattatcaaatgtttccacctattctgctcaccatgcattcagaggaaccttgag
attcgccaccggaaatgccctggctgcggaaccccattcggacaaaatgacgttagggag
gtgaagatatga
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